Transcriptome datasets of wheat plant cultures treated with seed priming fertilizer.

IF 1.4 Q3 MULTIDISCIPLINARY SCIENCES
Data in Brief Pub Date : 2025-09-10 eCollection Date: 2025-10-01 DOI:10.1016/j.dib.2025.112050
Kincső Decsi, Mostafa Ahmed, Roquia Rizk, Donia Abdul-Hamid, Zoltán Tóth
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引用次数: 0

Abstract

Extreme weather conditions cause stress in agriculture. To prevent these stress effects, techniques are now available that focus on prevention. One of these solutions could be the use of priming agents, which prepare plants for stress effects, as their application can trigger plant defense responses. Wheat plants were treated with seed priming fertilizer in advance and then exposed them to drought stress during the growing season. Deep RNA sequencing was performed using the NGS technique, which sequences - after processing and evaluation - are suitable for examining the stimulatory effects of seed priming and for monitoring the long-term effects of priming during stress effects. Four forward and reverse SRA data sets were deposited in NCBI. In addition, a file - containing the de novo transcriptome assembled from the cleaned and filtered raw reads (Transcriptome Shotgun Assembly - TSA) and the count table from the RNA-sequencing read quantification (Count table) - were deposited in the Mendeley database. Future results from the databases will be suitable for the immediate (priming) and long-term (under stress conditions) study of the effects of treatments and will allow the identification and monitoring of stimulated plant biochemical processes - based on gene expression changes.

Abstract Image

Abstract Image

种子催肥处理小麦植株培养物转录组数据集。
极端天气条件给农业造成压力。为了防止这些压力效应,现在有一些技术侧重于预防。其中一种解决方案可能是使用引物剂,它可以使植物为应激效应做好准备,因为它们的应用可以引发植物的防御反应。小麦植株在生长季节提前施用引种肥,然后再进行干旱胁迫。利用NGS技术进行了深度RNA测序,这些序列经过处理和评估后,适合于检测种子启动的刺激效应,以及监测应激效应期间启动的长期效应。NCBI存储了4组SRA正、反向数据集。此外,一个包含从清洁和过滤的原始reads组装的从头转录组(转录组Shotgun Assembly - TSA)和rna测序reads定量计数表(计数表)的文件被存放在Mendeley数据库中。来自数据库的未来结果将适合于处理效果的即时(启动)和长期(在胁迫条件下)研究,并且将允许识别和监测受刺激的植物生化过程-基于基因表达变化。
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来源期刊
Data in Brief
Data in Brief MULTIDISCIPLINARY SCIENCES-
CiteScore
3.10
自引率
0.00%
发文量
996
审稿时长
70 days
期刊介绍: Data in Brief provides a way for researchers to easily share and reuse each other''s datasets by publishing data articles that: -Thoroughly describe your data, facilitating reproducibility. -Make your data, which is often buried in supplementary material, easier to find. -Increase traffic towards associated research articles and data, leading to more citations. -Open up doors for new collaborations. Because you never know what data will be useful to someone else, Data in Brief welcomes submissions that describe data from all research areas.
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