M. A. Semenova, O. M. Smirnova, V. V. Britikov, E. V. Britikova, A. P. Khodnenko, Y. V. Bershatskii, A. A. Ignatova, E. V. Bocharov, M. P. Kirpichnikov, D. A. Dolgikh, R. V. Chertkova
{"title":"Development of a Bacterial Expression System for Producing 15N/13C-Labeled Neuroglobin and Cytochrome C","authors":"M. A. Semenova, O. M. Smirnova, V. V. Britikov, E. V. Britikova, A. P. Khodnenko, Y. V. Bershatskii, A. A. Ignatova, E. V. Bocharov, M. P. Kirpichnikov, D. A. Dolgikh, R. V. Chertkova","doi":"10.1134/S1068162025602083","DOIUrl":null,"url":null,"abstract":"<p><b>Objective:</b> Neuroglobin and cytochrome <i>c</i> are hemoproteins whose interaction is suggested to play an important role in preventing apoptotic cell death of neurons. Therefore, studying the molecular mechanism of neuroglobin-cytochrome <i>c</i> complex formation is of significant interest. Given their small hydrodynamic size and high water solubility, these hemoproteins are well-suited for NMR spectroscopy studies, provided they are isotopically labeled with <sup>13</sup>C and <sup>15</sup>N. The aim of this work was to develop a highly efficient system for the production of <sup>15</sup>N/<sup>13</sup>C-labeled human neuroglobin and cytochrome <i>c</i>. <b>Methods:</b> The corresponding producer strains were constructed, and optimal cultivation conditions were selected, including incubation temperature and duration, medium composition, and the concentration of the expression inducer. The purified <sup>15</sup>N-labeled hemoproteins were analyzed using UV-Vis, circular dichroism (CD), and <sup>1</sup>H-<sup>15</sup>N HSQC NMR spectroscopy. <b>Results and Discussion:</b> Far- and near-UV CD spectroscopy analysis results indicated that the secondary structure composition of <sup>15</sup>N-neuroglobin is consistent with the theoretical prediction, and the heme orientation within the molecules is predominantly canonical. According to the 2D <sup>1</sup>H-<sup>15</sup>N HSQC NMR spectra of human neuroglobin and cytochrome <i>c</i>, the proteins are folded into their native conformation, characterized by a predominantly α-helical structure. <b>Conclusions:</b> An effective system for producing isotopically labeled human neuroglobin and cytochrome <i>c</i> has been developed. This system enables the preparation of high-purity <sup>15</sup>N/<sup>13</sup>C-labeled proteins suitable for structure and dynamics studies using modern high-resolution NMR spectroscopy.</p>","PeriodicalId":758,"journal":{"name":"Russian Journal of Bioorganic Chemistry","volume":"51 5","pages":"2077 - 2088"},"PeriodicalIF":1.7000,"publicationDate":"2025-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Bioorganic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1134/S1068162025602083","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Objective: Neuroglobin and cytochrome c are hemoproteins whose interaction is suggested to play an important role in preventing apoptotic cell death of neurons. Therefore, studying the molecular mechanism of neuroglobin-cytochrome c complex formation is of significant interest. Given their small hydrodynamic size and high water solubility, these hemoproteins are well-suited for NMR spectroscopy studies, provided they are isotopically labeled with 13C and 15N. The aim of this work was to develop a highly efficient system for the production of 15N/13C-labeled human neuroglobin and cytochrome c. Methods: The corresponding producer strains were constructed, and optimal cultivation conditions were selected, including incubation temperature and duration, medium composition, and the concentration of the expression inducer. The purified 15N-labeled hemoproteins were analyzed using UV-Vis, circular dichroism (CD), and 1H-15N HSQC NMR spectroscopy. Results and Discussion: Far- and near-UV CD spectroscopy analysis results indicated that the secondary structure composition of 15N-neuroglobin is consistent with the theoretical prediction, and the heme orientation within the molecules is predominantly canonical. According to the 2D 1H-15N HSQC NMR spectra of human neuroglobin and cytochrome c, the proteins are folded into their native conformation, characterized by a predominantly α-helical structure. Conclusions: An effective system for producing isotopically labeled human neuroglobin and cytochrome c has been developed. This system enables the preparation of high-purity 15N/13C-labeled proteins suitable for structure and dynamics studies using modern high-resolution NMR spectroscopy.
期刊介绍:
Russian Journal of Bioorganic Chemistry publishes reviews and original experimental and theoretical studies on the structure, function, structure–activity relationships, and synthesis of biopolymers, such as proteins, nucleic acids, polysaccharides, mixed biopolymers, and their complexes, and low-molecular-weight biologically active compounds (peptides, sugars, lipids, antibiotics, etc.). The journal also covers selected aspects of neuro- and immunochemistry, biotechnology, and ecology.