Unlocking the anticancer role of alpha-phellandrene via TRPM4 channel modulation in lung cancer

IF 3.1 4区 生物学 Q2 BIOLOGY
Akanksha Singh , Shristi Modanwal , Abha Meena , Nidhi Mishra
{"title":"Unlocking the anticancer role of alpha-phellandrene via TRPM4 channel modulation in lung cancer","authors":"Akanksha Singh ,&nbsp;Shristi Modanwal ,&nbsp;Abha Meena ,&nbsp;Nidhi Mishra","doi":"10.1016/j.compbiolchem.2025.108688","DOIUrl":null,"url":null,"abstract":"<div><div>Lung cancer remains one of the leading causes of death worldwide, and in major cases accounts for non-small cell lung cancer (NSCLC). Recent advances in targeted therapy have greatly improved treatment outcomes by concentrating on specific genes, proteins, and signaling pathways in tumors, providing a precise treatment method that causes less damage to healthy cells. In the context of targeted therapy, one more target biomarker has been identified, ion channels, which have been considered diverse regulators in the progression of lung cancer. Transient receptor potential (TRP) channels have captivated tremendous appreciation as promising drug targets over the past few years. Importantly, TRPM, a family of TRP that are key regulators of calcium homeostasis, have emerged as promising therapeutic targets due to their overexpression in various cancers, including lung cancer, as well as their involvement in tumor progression, metastasis, and apoptosis resistance. This study investigates the potential of naturally occurring monoterpenes as TRPM channel modulators using an <em>in silico</em> approach. Fifteen monoterpenes were selected and evaluated for their pharmacokinetic properties (ADMET), drug-likeness, and molecular docking study against TRPM2, TRPM4, TRPM5, TRPM7, and TRPM8 isoforms. Alpha-Phellandrene showed significant binding affinity toward TRPM4 (-6.0 kcal/mol) and notably shared key binding residues (ARG960, TYR964, GLU978, GLN976, PRO975, GLN973, LEU968) with the standard inhibitor 9-Phenanthrol, indicating its potential as a natural mimic. Molecular dynamics (MD) simulations further validated the structural stability of the TRPM4–alpha–phellandrene complex over 100 ns. Research findings suggested alpha-phellandrene as a promising candidate for developing TRPM4-targeted therapies in lung cancer.</div></div>","PeriodicalId":10616,"journal":{"name":"Computational Biology and Chemistry","volume":"120 ","pages":"Article 108688"},"PeriodicalIF":3.1000,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational Biology and Chemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1476927125003494","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Lung cancer remains one of the leading causes of death worldwide, and in major cases accounts for non-small cell lung cancer (NSCLC). Recent advances in targeted therapy have greatly improved treatment outcomes by concentrating on specific genes, proteins, and signaling pathways in tumors, providing a precise treatment method that causes less damage to healthy cells. In the context of targeted therapy, one more target biomarker has been identified, ion channels, which have been considered diverse regulators in the progression of lung cancer. Transient receptor potential (TRP) channels have captivated tremendous appreciation as promising drug targets over the past few years. Importantly, TRPM, a family of TRP that are key regulators of calcium homeostasis, have emerged as promising therapeutic targets due to their overexpression in various cancers, including lung cancer, as well as their involvement in tumor progression, metastasis, and apoptosis resistance. This study investigates the potential of naturally occurring monoterpenes as TRPM channel modulators using an in silico approach. Fifteen monoterpenes were selected and evaluated for their pharmacokinetic properties (ADMET), drug-likeness, and molecular docking study against TRPM2, TRPM4, TRPM5, TRPM7, and TRPM8 isoforms. Alpha-Phellandrene showed significant binding affinity toward TRPM4 (-6.0 kcal/mol) and notably shared key binding residues (ARG960, TYR964, GLU978, GLN976, PRO975, GLN973, LEU968) with the standard inhibitor 9-Phenanthrol, indicating its potential as a natural mimic. Molecular dynamics (MD) simulations further validated the structural stability of the TRPM4–alpha–phellandrene complex over 100 ns. Research findings suggested alpha-phellandrene as a promising candidate for developing TRPM4-targeted therapies in lung cancer.
通过TRPM4通道调节在肺癌中的抗癌作用
肺癌仍然是世界范围内死亡的主要原因之一,在主要病例中是非小细胞肺癌(NSCLC)。靶向治疗的最新进展通过专注于肿瘤中的特定基因、蛋白质和信号通路,极大地改善了治疗效果,提供了一种对健康细胞损害较小的精确治疗方法。在靶向治疗的背景下,已经确定了另一个目标生物标志物,离子通道,它被认为是肺癌进展中的多种调节因子。在过去的几年中,瞬时受体电位(TRP)通道作为有前途的药物靶点受到了极大的重视。重要的是,TRPM是钙稳态的关键调节因子,由于其在包括肺癌在内的各种癌症中的过度表达以及参与肿瘤进展、转移和细胞凋亡抵抗,TRPM家族已成为有希望的治疗靶点。本研究利用硅方法研究了天然单萜烯作为TRPM通道调节剂的潜力。选取15种单萜进行药代动力学特性(ADMET)、药物相似性评估,并对trpmm2、TRPM4、TRPM5、TRPM7和TRPM8亚型进行分子对接研究。α - phellandrene对TRPM4具有显著的结合亲和力(-6.0 kcal/mol),并与标准抑制剂9-Phenanthrol具有相同的关键结合残基(ARG960, TYR964, GLU978, GLN976, PRO975, GLN973, LEU968),表明其具有天然模拟作用的潜力。分子动力学(MD)模拟进一步验证了trpm4 -邻苯二烯配合物在100 ns以上的结构稳定性。研究结果表明-茶树烯是开发trpm4靶向肺癌治疗的有希望的候选者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信