{"title":"High potential microbial denitrification in non-hypoxic intermediate waters of the South China Sea basin","authors":"Jian Zeng, Baohong Chen, Guozong Shi, Yanyun Guan, Zesheng Zhuo","doi":"10.3389/fmars.2025.1636874","DOIUrl":null,"url":null,"abstract":"IntroductionThe discovery of microbial denitrification in non-extreme oxygen-deficient environments has drawn growing attention. At the same time, it is reshaping previous understanding of the spatial pattern of marine nitrogen (N) sinks. The non-hypoxic subsurface and intermediate waters of the South China Sea (SCS) basin possess potential favorable conditions for the occurrence of microbial denitrification, which are long-term overlooked and remained unexplored.MethodsMethods: In this study, a series of <jats:sup>15</jats:sup>N-isotope tracers incubation experiments, combined with functional genes characterizations and hydro-chemical parameters analysis, were conducted during cruise. Rigorous statistical analysis was performed to reveal the correlations between environmental variables and denitrifying activity.ResultsIt showed that representative denitrification functional genes (narG and nirS) are ubiquitously presented at moderate abundances (0.1×10<jats:sup>4</jats:sup>~12×10<jats:sup>5</jats:sup> copies/L) across the water columns. In the intermediate waters (600~1500 m) with low dissolved oxygen (DO) saturation (20%~30%), weak in situ denitrification rates (0.2~1.1 nmol N<jats:sub>2</jats:sub>/L/d) were detected. However, under simulated anoxic conditions, active denitrification was detected in most sampling layers, with potential rates (0.2~33 nmol N<jats:sub>2</jats:sub>/L/d) comparable to those in typical oxygen-deficient zones (ODZs).DiscussionSignificant correlations between suspended particulate matter (SPM) and particulate organic carbon (POC), contents with both denitrification rates and functional gene abundances were observed. It is inferred that low ambient DO levels, as well as hypoxic micro-niches in particulate matter, may together drive denitrification occurrence in the basin waters. Besides, particulate matter plays a critical role in influencing metabolic activity and spatial variability of denitrification in the basin. Since the mid-water of the SCS basin sustains a large particulate loading from terrestrial input and hydrodynamics, it is likely to maintain strong denitrification potential in the water body. We further propose a preliminary framework of coupling between particle transport driven by complex environmental dynamics and microbial N removal. Our study not only provides a potential implication for the need to re-evaluate the N budgets in the SCS basin, but also offers a new perspective of mechanism interpretation for microbial N removal in non-hypoxic marine environments.","PeriodicalId":12479,"journal":{"name":"Frontiers in Marine Science","volume":"84 1","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Marine Science","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fmars.2025.1636874","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
IntroductionThe discovery of microbial denitrification in non-extreme oxygen-deficient environments has drawn growing attention. At the same time, it is reshaping previous understanding of the spatial pattern of marine nitrogen (N) sinks. The non-hypoxic subsurface and intermediate waters of the South China Sea (SCS) basin possess potential favorable conditions for the occurrence of microbial denitrification, which are long-term overlooked and remained unexplored.MethodsMethods: In this study, a series of 15N-isotope tracers incubation experiments, combined with functional genes characterizations and hydro-chemical parameters analysis, were conducted during cruise. Rigorous statistical analysis was performed to reveal the correlations between environmental variables and denitrifying activity.ResultsIt showed that representative denitrification functional genes (narG and nirS) are ubiquitously presented at moderate abundances (0.1×104~12×105 copies/L) across the water columns. In the intermediate waters (600~1500 m) with low dissolved oxygen (DO) saturation (20%~30%), weak in situ denitrification rates (0.2~1.1 nmol N2/L/d) were detected. However, under simulated anoxic conditions, active denitrification was detected in most sampling layers, with potential rates (0.2~33 nmol N2/L/d) comparable to those in typical oxygen-deficient zones (ODZs).DiscussionSignificant correlations between suspended particulate matter (SPM) and particulate organic carbon (POC), contents with both denitrification rates and functional gene abundances were observed. It is inferred that low ambient DO levels, as well as hypoxic micro-niches in particulate matter, may together drive denitrification occurrence in the basin waters. Besides, particulate matter plays a critical role in influencing metabolic activity and spatial variability of denitrification in the basin. Since the mid-water of the SCS basin sustains a large particulate loading from terrestrial input and hydrodynamics, it is likely to maintain strong denitrification potential in the water body. We further propose a preliminary framework of coupling between particle transport driven by complex environmental dynamics and microbial N removal. Our study not only provides a potential implication for the need to re-evaluate the N budgets in the SCS basin, but also offers a new perspective of mechanism interpretation for microbial N removal in non-hypoxic marine environments.
期刊介绍:
Frontiers in Marine Science publishes rigorously peer-reviewed research that advances our understanding of all aspects of the environment, biology, ecosystem functioning and human interactions with the oceans. Field Chief Editor Carlos M. Duarte at King Abdullah University of Science and Technology Thuwal is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, policy makers and the public worldwide.
With the human population predicted to reach 9 billion people by 2050, it is clear that traditional land resources will not suffice to meet the demand for food or energy, required to support high-quality livelihoods. As a result, the oceans are emerging as a source of untapped assets, with new innovative industries, such as aquaculture, marine biotechnology, marine energy and deep-sea mining growing rapidly under a new era characterized by rapid growth of a blue, ocean-based economy. The sustainability of the blue economy is closely dependent on our knowledge about how to mitigate the impacts of the multiple pressures on the ocean ecosystem associated with the increased scale and diversification of industry operations in the ocean and global human pressures on the environment. Therefore, Frontiers in Marine Science particularly welcomes the communication of research outcomes addressing ocean-based solutions for the emerging challenges, including improved forecasting and observational capacities, understanding biodiversity and ecosystem problems, locally and globally, effective management strategies to maintain ocean health, and an improved capacity to sustainably derive resources from the oceans.