Testing the priming effect in the deep ocean: are microorganisms too starved to consume recalcitrant organic carbon?

IF 3.7 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Richard LaBrie, Corday R Selden, Nagissa Mahmoudi
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引用次数: 0

Abstract

Deep ocean dissolved organic carbon (DOC) is one of the largest pools of reduced carbon on Earth. Many DOC compounds escape microbial degradation and persist for thousands of years in the ocean. Although many hypotheses have been proposed, the mechanisms responsible for this long-term stability remain unresolved. Heterotrophic microorganisms in the deep ocean are energetically starved and exhibit low metabolic activity. Here, we investigated whether the severe energy limitation in deep-sea environments acts as a barrier to microbial degradation of DOC. We hypothesized that alleviating this energetic barrier through the addition of labile compounds (i.e., the priming effect) could stimulate microbial consumption of DOC. We conducted 62-day bottle incubations with deep seawater from the Southern Ocean that were amended with simple organic carbon, nitrogen, and/or phosphorus-containing compounds. We tracked DOC concentration, cell abundance, and microbial community structure over the course of the experiment. Our results show no evidence of a priming effect regardless of the priming compound. Interestingly, priming compounds were selected for distinct microbial populations even when the compounds were chemically similar. Pseudoalteromonas and Pseudomonas were enriched across all amended bottles, and their competition for labile substrates likely contributed to observed variations in DOC consumption. Our results suggest that the persistence of DOC is not driven by the energetic state of deep-sea microorganisms. These findings indicate that inputs of fresh carbon to the deep ocean are unlikely to trigger extensive degradation of the existing DOC pool, reinforcing its role as a stable long-term reservoir of carbon.IMPORTANCEThe oceans store vast amounts of dissolved organic carbon (DOC) that can resist microbial degradation for thousands of years. The mechanisms that underlie the long-term stability of DOC in the ocean are still debated. Microorganisms in this environment exhibit low metabolic activity and are energetically starved. We tested whether the microbial degradation of DOC could be stimulated through the addition of labile compounds. Surprisingly, alleviating energetic constraints did not stimulate the consumption of deep ocean DOC. Additionally, our results suggest that competition among taxa is an important constraint on dissolved organic carbon consumption, with implications for ecosystem processing. Our study suggests that the long-term stability of deep ocean DOC reflects inherent chemical or structural resistance to microbial degradation, rather than ecological or energetic constraints. This finding is also of consequence for ongoing geoengineering efforts that aim to remove atmospheric carbon by increasing carbon export to the deep sea.

在深海中测试启动效应:微生物是否太饥饿而无法消耗顽固的有机碳?
深海溶解有机碳(DOC)是地球上最大的还原碳库之一。许多DOC化合物逃脱了微生物的降解,并在海洋中持续存在数千年。尽管提出了许多假设,但这种长期稳定性的机制仍未得到解决。深海中的异养微生物能量匮乏,代谢活性低下。在这里,我们研究了深海环境中严重的能量限制是否成为微生物降解DOC的障碍。我们假设,通过添加不稳定的化合物(即启动效应)来缓解这种能量障碍可以刺激微生物对DOC的消耗。我们对来自南大洋的深层海水进行了62天的瓶培养,这些海水中添加了简单的有机碳、氮和/或含磷化合物。在实验过程中,我们跟踪了DOC浓度、细胞丰度和微生物群落结构。我们的结果显示,没有证据表明,无论启动化合物。有趣的是,即使化合物的化学性质相似,也会为不同的微生物种群选择引物。假交替单胞菌和假单胞菌在所有修改过的瓶子中都富集,它们对不稳定底物的竞争可能导致观察到的DOC消耗变化。我们的研究结果表明,DOC的持久性不是由深海微生物的能量状态驱动的。这些发现表明,向深海输入的新鲜碳不太可能引发现有DOC库的广泛降解,从而加强了其作为稳定的长期碳库的作用。海洋储存了大量的溶解有机碳(DOC),可以抵抗微生物降解数千年。海洋中DOC长期稳定的机制仍存在争议。这种环境下的微生物表现出较低的代谢活性,并且能量匮乏。我们测试了是否可以通过添加不稳定的化合物来刺激微生物降解DOC。令人惊讶的是,缓解能量限制并没有刺激深海DOC的消耗。此外,我们的研究结果表明,类群之间的竞争是限制溶解有机碳消耗的重要因素,这对生态系统的处理具有重要意义。我们的研究表明,深海DOC的长期稳定性反映了对微生物降解的内在化学或结构抗性,而不是生态或能量限制。这一发现对正在进行的旨在通过增加向深海的碳输出来去除大气碳的地球工程工作也具有重要意义。
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来源期刊
Applied and Environmental Microbiology
Applied and Environmental Microbiology 生物-生物工程与应用微生物
CiteScore
7.70
自引率
2.30%
发文量
730
审稿时长
1.9 months
期刊介绍: Applied and Environmental Microbiology (AEM) publishes papers that make significant contributions to (a) applied microbiology, including biotechnology, protein engineering, bioremediation, and food microbiology, (b) microbial ecology, including environmental, organismic, and genomic microbiology, and (c) interdisciplinary microbiology, including invertebrate microbiology, plant microbiology, aquatic microbiology, and geomicrobiology.
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