The success of artificial selection for collective composition hinges on initial and target values.

IF 6.4 1区 生物学 Q1 BIOLOGY
eLife Pub Date : 2025-09-15 DOI:10.7554/eLife.97461
Juhee Lee, Wenying Shou, Hye Jin Park
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引用次数: 0

Abstract

Microbial collectives can perform functions beyond the capability of individual members. Enhancing collective functions through artificial selection is, however, challenging. Here, we explore the 'rafting-a-waterfall' metaphor where achieving a target population composition depends on both target and initial compositions. Specifically, collectives comprising fast-growing (F) and slow-growing (S) individuals were grown for 'maturation' time, and the collective with S-frequency closest to the target value is chosen to 'reproduce' via inoculating offspring collectives. During collective maturation, intra-collective selection acts like a waterfall, relentlessly driving the S-frequency to lower values, while during collective reproduction, inter-collective selection resembles a rafter striving to reach the target frequency. Using simulations and analytical calculations, we show that intermediate target S frequencies are the most challenging, akin to a target within the vertical drop of a waterfall, rather than above or below it. This arises because intra-collective selection is the strongest at intermediate S-frequencies, which can overpower inter-collective selection. While achieving a low target S frequencies is consistently feasible, attaining high target S-frequencies requires an initially high S-frequency - much like a raft that can descend but not ascend a waterfall. As Newborn size increases, the region of achievable target frequency is reduced until no frequency is achievable. In contrast, the number of collectives under selection plays a less critical role. In scenarios involving more than two populations, the evolutionary trajectory must navigate entirely away from the metaphorical 'waterfall drop.' Our findings illustrate that the strength of intra-collective evolution is frequency-dependent, with implications in experimental planning.

集体作文人工选择的成功与否取决于初始值和目标值。
微生物集体可以执行超出个体成员能力的功能。然而,通过人工选择来增强集体功能是具有挑战性的。在这里,我们探索了“漂流瀑布”的比喻,其中实现目标人口组成取决于目标和初始组成。具体而言,由快速生长(F)和慢生长(S)个体组成的集体培养“成熟”时间,并选择S频率最接近目标值的集体通过接种后代集体进行“繁殖”。在集体成熟过程中,集体内的选择就像瀑布一样,无情地将s频率推向更低的值,而在集体繁殖过程中,集体间的选择就像一个努力达到目标频率的椽子。通过模拟和分析计算,我们发现中间目标S频率是最具挑战性的,类似于瀑布垂直落差内的目标,而不是高于或低于它。这是因为群体内的选择在中间s频率是最强的,这可以压倒群体间的选择。虽然实现低目标S频率始终是可行的,但要实现高目标S频率,就需要初始的高S频率——就像木筏在瀑布中只能下降而不能上升一样。随着新生儿尺寸的增大,可达到目标频率的区域逐渐缩小,直至无法达到目标频率。相比之下,选择下的集体数量起的作用就不那么重要了。在涉及两个以上种群的情况下,进化轨迹必须完全偏离比喻中的“瀑布下降”。我们的研究结果表明,集体内进化的强度是频率依赖的,这对实验计划有影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
eLife
eLife BIOLOGY-
CiteScore
12.90
自引率
3.90%
发文量
3122
审稿时长
17 weeks
期刊介绍: eLife is a distinguished, not-for-profit, peer-reviewed open access scientific journal that specializes in the fields of biomedical and life sciences. eLife is known for its selective publication process, which includes a variety of article types such as: Research Articles: Detailed reports of original research findings. Short Reports: Concise presentations of significant findings that do not warrant a full-length research article. Tools and Resources: Descriptions of new tools, technologies, or resources that facilitate scientific research. Research Advances: Brief reports on significant scientific advancements that have immediate implications for the field. Scientific Correspondence: Short communications that comment on or provide additional information related to published articles. Review Articles: Comprehensive overviews of a specific topic or field within the life sciences.
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