U-ConvNext: A Robust Approach to Glioma Segmentation in Intraoperative Ultrasound.

Amir M Vahdani, Mahdiyeh Rahmani, Ahmad Pour-Rashidi, Alireza Ahmadian, Parastoo Farnia
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Abstract

Intraoperative tumor imaging is critical to achieving maximal safe resection during neurosurgery, especially for low-grade glioma resection. Given the convenience of ultrasound as an intraoperative imaging modality, but also the limitations of the ultrasound modality and the time-consuming process of manual tumor segmentation, we propose a learning-based model for the accurate segmentation of low-grade gliomas in ultrasound images. We developed a novel U-net-based architecture adopting the block architecture of the ConvNext V2 model, titled U-ConvNext, which also incorporates various architectural improvements including global response normalization, fine-tuned kernel sizes, and inception layers. We also adopted the CutMix data augmentation technique for semantic segmentation, aiming for enhanced texture detection. Conformal segmentation, a novel approach to conformal prediction for binary semantic segmentation, was also developed for uncertainty quantification, providing calibrated measures of model uncertainty in a visual format. The proposed models were trained and evaluated on three subsets of images in the RESECT dataset and achieved hold-out test Dice scores of 84.63%, 74.52%, and 90.82% on the "before," "during," and "after" subsets, respectively, which indicates increases of ~ 13-31% compared to the state of the art. Furthermore, external evaluation on the ReMIND dataset indicated a robust performance (dice score of 79.17% [95% CI: 77.82-81.62] and only a moderate decline of < 3% in expected calibration error. Our approach integrates various innovations in model design, model training, and uncertainty quantification, achieving improved results on the segmentation of low-grade glioma in ultrasound images during neurosurgery.

U-ConvNext:术中超声对胶质瘤分割的鲁棒方法。
在神经外科手术中,术中肿瘤成像对于实现最大程度的安全切除至关重要,特别是对于低级别胶质瘤的切除。鉴于超声作为术中成像方式的便利性,以及超声方式的局限性和人工肿瘤分割的耗时,我们提出了一种基于学习的低级别胶质瘤超声图像准确分割模型。我们开发了一种新的基于u -net的架构,采用了ConvNext V2模型的块架构,名为U-ConvNext,它还包含了各种架构改进,包括全局响应规范化、微调内核大小和初始化层。我们还采用了CutMix数据增强技术进行语义分割,旨在增强纹理检测。保形分割是一种用于二元语义分割的保形预测的新方法,它也被开发用于不确定性量化,以可视化的形式提供模型不确定性的校准测量。所提出的模型在RESECT数据集中的三个图像子集上进行了训练和评估,在“之前”、“期间”和“之后”子集上分别获得了84.63%、74.52%和90.82%的hold-out测试Dice分数,与目前的水平相比,这表明提高了~ 13-31%。此外,对ReMIND数据集的外部评估表明其性能稳健(骰子得分为79.17% [95% CI: 77.82-81.62]),仅适度下降
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