Modification of biochar by iron containing adsorption centers as a method to enhance the remediation of perfluorooctanoic (PFOA) and (PFOS) acids from water and soil: a density functional theory study

IF 2.5 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Leonid Gorb, Anita Sosnowska, Natalia Bulawska, Danuta Leszczynska, Tomasz Puzyn, Jerzy Leszczynski
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引用次数: 0

Abstract

Perfluoroalkyl and polyfluoroalkyl substances (PFAS), with over 15,000 types listed in the US EPA’s CompTox database, are found in everyday items like textiles, packaging, firefighting foams, and medical devices. Their widespread use has led to concerning health effects—including cancers, elevated cholesterol, and fertility issues—with detectable levels present in 98% of Americans.

While perfluorooctanoic (PFOA) and perfluorooctanesulphonic (PFOS) are among the most studied, their environmental behavior and ecological interactions remain poorly understood. Advances in computer-based methods, including chemoinformatics and quantum modeling, now aid in predicting properties and simulating PFAS dynamics.

Biochar (BC), produced via biomass pyrolysis under limited oxygen, is known for its porosity and adsorption capabilities. Magnetic biochar (MBC), enhanced with iron-based compounds, adds the benefit of magnetic separation, making it ideal for water decontamination. This paper explores the use of MBC to remove PFOA and PFOS from the environment, leveraging computational tools to investigate molecular interactions and adsorption properties.

A doubled crystallographic unit of hematite (Fe₂₄O₃₆) was constructed and fully optimized using density functional theory (DFT) with the M06-2X functional. Geometry optimization used the 6-31G(d,p) basis set, while single-point energies were calculated with 6–311 + + G(d,p). Antiferromagnetic conditions were ensured by setting the total spin to zero (Sz = 0), and triplet instability analysis was performed to evaluate ferromagnetic potential.

To simulate bulk water effects on adsorption, the CPCM solvation model (ε = 78.3) was applied. Harmonic frequency analysis confirmed structural minima, and Gibbs free energies were calculated using Gaussian 16. PFOA and PFOS, with highly negative pKa values (~ –0.1 and <).

Quadratic SCF convergence (scf = qc) addressed numerical challenges, and interaction energies were corrected for basis set superposition error using the counterpoise method. Calculated IR spectra and molecular visualizations were generated with Chemcraft, without applying scaling factors.

含铁吸附中心对生物炭进行改性,以加强对水和土壤中全氟辛酸(PFOA)和(PFOS)酸的修复:密度泛函理论研究
全氟烷基和多氟烷基物质(PFAS)在美国环保署的CompTox数据库中列出了超过15,000种,存在于纺织品、包装、消防泡沫和医疗设备等日常用品中。它们的广泛使用已经导致了令人担忧的健康影响——包括癌症、胆固醇升高和生育问题——98%的美国人体内都有可检测到的水平。虽然全氟辛酸(PFOA)和全氟辛烷磺酸(PFOS)是研究最多的,但它们的环境行为和生态相互作用仍然知之甚少。基于计算机的方法的进步,包括化学信息学和量子建模,现在有助于预测特性和模拟PFAS动力学。生物炭(BC)是在有限氧条件下通过生物质热解产生的,以其孔隙度和吸附能力而闻名。磁性生物炭(MBC)经铁基化合物增强,增加了磁分离的好处,使其成为水净化的理想选择。本文探讨了利用MBC从环境中去除PFOA和PFOS的方法,利用计算工具研究分子相互作用和吸附特性。采用密度泛函理论(DFT)构建了Fe₂₄O₃₆双晶单元,并对其M06-2X泛函进行了优化。几何优化采用6-31G(d,p)基集,单点能量计算采用6-311 + + G(d,p)基集。通过将总自旋设为零(Sz = 0)来确保反铁磁条件,并进行三重态不稳定性分析来评估铁磁势。为了模拟体积水对吸附的影响,采用CPCM溶剂化模型(ε = 78.3)。谐波频率分析确定了结构最小值,并利用高斯16计算了吉布斯自由能。PFOA和PFOS具有高度负的pKa值(~ -0.1和<;)。二次SCF收敛(SCF = qc)解决了数值难题,并利用平衡法对相互作用能进行了基集叠加误差的校正。计算的红外光谱和分子可视化是用Chemcraft生成的,不使用缩放因子。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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