Thermodynamically Coupled Three-Enzyme Cascade Converts Styrene to Cinnamic Acid, l-Phenylalanine, and Phenylpyruvate via CO2 Fixation without External Energy Cofactors

IF 3.9 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Sunga Cho, Ye Chan Kim, Amol D. Pagar, Sangwoo Joo, Pritam Giri, Subin Yun, Geon-Woo Park, Young-Soo Keum and Hyungdon Yun*, 
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Abstract

We report the development of a cofactor-free CO2 fixation platform based on a three-enzyme cascade comprising Aspergillus niger ferulic acid decarboxylase (AnFDC), Anabaena variabilis phenylalanine ammonia-lyase (AvPAL), and Proteus mirabilis l-amino acid deaminase (PmLAAD). Unlike canonical ATP- or NADPH-dependent CO2 assimilation pathways, this system uses a prFMN-dependent carboxylation mechanism, enabling efficient CO2 incorporation under ambient conditions without energy-intensive cofactors. Systematic screening identified AnFDC as the optimal decarboxylase for styrene carboxylation, while AvPAL and PmLAAD were selected for their superior catalytic efficiencies in the cascade. Optimization of prFMN biosynthesis (via UbiX/SccK coexpression), enzyme expression, and reaction conditions (notably, 1.5 M ammonium bicarbonate, pH 8.5) significantly enhanced cascade performance. Whole-cell microbial consortia with tailored cell ratios further alleviated kinetic bottlenecks, achieving a 3-fold improvement in phenylpyruvic acid production (6% conversion) from styrene and CO2. The integrated cascade drives the CO2 fixation with an overall equilibrium constant (Keq′) of 4.3 × 1030, converting low-cost styrene into high-value phenylpyruvic acid. Through enzyme screening and step-by-step optimization, we established an energy-independent system for CO2 fixation. Our work challenges the cofactor dependence in biocatalytic carbon fixation for aromatic compounds and paves a novel way for sustainable, carbon-negative chemical manufacturing.

Abstract Image

热力学偶联的三酶级联通过CO2固定将苯乙烯转化为肉桂酸、l-苯丙氨酸和苯丙酮酸,无需外部能量辅助因子。
我们报道了一种基于三酶级联的无辅助因子CO2固定平台的开发,该酶级联包括黑曲霉阿维酸脱羧酶(AnFDC)、变水藻苯丙氨酸解氨酶(AvPAL)和奇异变形杆菌l-氨基酸脱氨酶(PmLAAD)。与典型的ATP或nadph依赖的二氧化碳同化途径不同,该系统使用依赖于prfmf的羧化机制,在环境条件下无需能量密集型辅助因子即可有效地吸收二氧化碳。系统筛选确定AnFDC为苯乙烯羧化的最佳脱羧酶,而AvPAL和PmLAAD则因其在级联反应中具有优异的催化效率而被选中。优化prFMN生物合成(通过UbiX/SccK共表达)、酶表达和反应条件(特别是1.5 M碳酸氢铵,pH 8.5)显著提高了级联性能。定制细胞比例的全细胞微生物联合体进一步缓解了动力学瓶颈,将苯乙烯和二氧化碳的苯丙酮酸产量(转化率为6%)提高了3倍。集成级联驱动CO2固定,总平衡常数(Keq’)为4.3 × 1030,将低成本苯乙烯转化为高价值的苯丙酮酸。通过酶筛选和逐步优化,我们建立了一个不依赖能量的CO2固定系统。我们的工作挑战了芳香化合物在生物催化固碳过程中对辅因子的依赖,并为可持续的碳负化学制造铺平了一条新的道路。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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