Neurotoxic mechanisms of the pesticide myclobutanil: integration of network toxicology, transcriptomics, and molecular simulation.

IF 1.2 4区 医学 Q4 PHARMACOLOGY & PHARMACY
Xenobiotica Pub Date : 2025-07-01 Epub Date: 2025-09-04 DOI:10.1080/00498254.2025.2550363
Jiaxin Zhou, Jianping Hu, Na Tian, Yingying Zhang, Chunshuang Shang
{"title":"Neurotoxic mechanisms of the pesticide myclobutanil: integration of network toxicology, transcriptomics, and molecular simulation.","authors":"Jiaxin Zhou, Jianping Hu, Na Tian, Yingying Zhang, Chunshuang Shang","doi":"10.1080/00498254.2025.2550363","DOIUrl":null,"url":null,"abstract":"<p><p>Myclobutanil, a pesticide commonly employed in agricultural practices for fruits, vegetables, and crops, is capable of crossing the blood-brain barrier (BBB) and persisting in cerebrospinal fluid, posing significant risks to human health. Consequently, it is crucial to systematically explore the molecular toxicological mechanisms underlying its neurotoxic effects.This study employed a systems-level approach that integrated weighted gene co-expression network analysis (WGCNA) and protein-protein interaction (PPI) network construction, followed by molecular docking and molecular dynamics (MD) simulations for validation.A total of 75 key targets were identified using cheminformatics tools (SEA, SwissTargetPrediction, TargetNet) and disease databases (GeneCards, OMIM, DisGeNET). Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway analysis revealed that Myclobutanil exposure induces neurotoxicity through multiple signalling pathways, particularly the Pathways of neurodegeneration-multiple diseases and PI3K-Akt signalling pathway.Transcriptomic analysis and WGCNA identified RAF1 as a significantly correlated target with Myclobutanil exposure. Molecular docking and MD simulations further confirmed a strong binding affinity between RAF1 and Myclobutanil, suggesting that RAF1 plays a pivotal role in Myclobutanil exposure neurotoxicity.This prospective study yields predictive insight into the molecular events underlying Myclobutanil exposure neurotoxicity and highlights candidate therapeutic targets that remain to be validated <i>in vivo</i>.</p>","PeriodicalId":23812,"journal":{"name":"Xenobiotica","volume":" ","pages":"572-585"},"PeriodicalIF":1.2000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Xenobiotica","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/00498254.2025.2550363","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/9/4 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"PHARMACOLOGY & PHARMACY","Score":null,"Total":0}
引用次数: 0

Abstract

Myclobutanil, a pesticide commonly employed in agricultural practices for fruits, vegetables, and crops, is capable of crossing the blood-brain barrier (BBB) and persisting in cerebrospinal fluid, posing significant risks to human health. Consequently, it is crucial to systematically explore the molecular toxicological mechanisms underlying its neurotoxic effects.This study employed a systems-level approach that integrated weighted gene co-expression network analysis (WGCNA) and protein-protein interaction (PPI) network construction, followed by molecular docking and molecular dynamics (MD) simulations for validation.A total of 75 key targets were identified using cheminformatics tools (SEA, SwissTargetPrediction, TargetNet) and disease databases (GeneCards, OMIM, DisGeNET). Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway analysis revealed that Myclobutanil exposure induces neurotoxicity through multiple signalling pathways, particularly the Pathways of neurodegeneration-multiple diseases and PI3K-Akt signalling pathway.Transcriptomic analysis and WGCNA identified RAF1 as a significantly correlated target with Myclobutanil exposure. Molecular docking and MD simulations further confirmed a strong binding affinity between RAF1 and Myclobutanil, suggesting that RAF1 plays a pivotal role in Myclobutanil exposure neurotoxicity.This prospective study yields predictive insight into the molecular events underlying Myclobutanil exposure neurotoxicity and highlights candidate therapeutic targets that remain to be validated in vivo.

农药丁腈的神经毒性机制:网络毒理学、转录组学和分子模拟的整合。
百丁腈是一种常用于水果、蔬菜和农作物的农药,它能够穿过血脑屏障(BBB)并持续存在于脑脊液中,对人类健康构成重大风险。因此,系统地探索其神经毒性作用的分子毒理学机制至关重要。本研究采用系统级方法,结合加权基因共表达网络分析(WGCNA)和蛋白-蛋白相互作用网络构建(PDC),然后进行分子对接和分子动力学(MD)模拟验证。利用化学信息学工具(SEA、SwissTargetPrediction、TargetNet)和疾病数据库(GeneCards、OMIM、DisGeNET)共确定了75个关键靶点。目标主要富集在基因本体(GO)类别中。具体来说,生物过程(BP)富集于信号转导、组蛋白H3Y41激酶活性的分子功能(MF)以及细胞质和胞内膜结合细胞器中的细胞成分(CC)。京都基因与基因组百科(KEGG)通路分析显示,Myclobutanil暴露通过多种信号通路诱导神经毒性,特别是神经变性-多发性疾病通路和PI3K-Akt信号通路。此外,转录组学分析和WGCNA发现RAF1是与Myclobutanil暴露显著相关的靶标。分子对接和MD模拟进一步证实了RAF1与Myclobutanil之间具有较强的结合亲和力,提示RAF1在Myclobutanil暴露神经毒性中起关键作用。这项前瞻性研究对Myclobutanil暴露神经毒性的分子事件提供了预测性的见解,并强调了仍有待体内验证的候选治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Xenobiotica
Xenobiotica 医学-毒理学
CiteScore
3.80
自引率
5.60%
发文量
96
审稿时长
2 months
期刊介绍: Xenobiotica covers seven main areas, including:General Xenobiochemistry, including in vitro studies concerned with the metabolism, disposition and excretion of drugs, and other xenobiotics, as well as the structure, function and regulation of associated enzymesClinical Pharmacokinetics and Metabolism, covering the pharmacokinetics and absorption, distribution, metabolism and excretion of drugs and other xenobiotics in manAnimal Pharmacokinetics and Metabolism, covering the pharmacokinetics, and absorption, distribution, metabolism and excretion of drugs and other xenobiotics in animalsPharmacogenetics, defined as the identification and functional characterisation of polymorphic genes that encode xenobiotic metabolising enzymes and transporters that may result in altered enzymatic, cellular and clinical responses to xenobioticsMolecular Toxicology, concerning the mechanisms of toxicity and the study of toxicology of xenobiotics at the molecular levelXenobiotic Transporters, concerned with all aspects of the carrier proteins involved in the movement of xenobiotics into and out of cells, and their impact on pharmacokinetic behaviour in animals and manTopics in Xenobiochemistry, in the form of reviews and commentaries are primarily intended to be a critical analysis of the issue, wherein the author offers opinions on the relevance of data or of a particular experimental approach or methodology
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信