A semi-mechanistic mathematical framework for simulating multi-hormone dynamics in reproductive endocrinology.

IF 4.1 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Computational and structural biotechnology journal Pub Date : 2025-08-14 eCollection Date: 2025-01-01 DOI:10.1016/j.csbj.2025.08.013
Alexandre Vallée, Anis Feki, Gaby Moawad, Jean-Marc Ayoubi
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引用次数: 0

Abstract

Background: The dynamic interplay of ovarian hormones is central to reproductive physiology, yet the complexity of their cyclic variations poses challenges for analysis, simulation, and teaching. This study presents a framework for generating physiologically constrained, multi-hormone synthetic time series that capture intra- and inter-individual variability across phenotypes.

Methods: We developed a semi-mechanistic mathematical framework to generate synthetic multi-hormone profiles (estradiol, FSH, LH, AMH, testosterone, GnRH) using parametric equations embedding known physiological feedbacks (e.g., estradiol-LH delay, estradiol suppression of FSH). Stochastic components were calibrated to reported physiological ranges. Eumenorrheic and PCOS-like phenotypes were defined through parameter adjustments. Data were analysed using Principal Component Analysis (PCA) for phenotype separation, and evaluated in a supervised setting using logistic regression with stratified train/test splitting, reporting accuracy, sensitivity, specificity, and ROC AUC.

Results: Eumenorrheic profiles displayed classical mid-cycle estradiol and LH peaks, biphasic FSH, and stable AMH and testosterone levels. In contrast, PCOS profiles showed elevated LH and testosterone, high AMH, blunted estradiol, and dysregulated GnRH pulsatility. PCA revealed clear separation between phenotypes (PC1 +PC2 = 82 % variance), and k-means clustering (k = 2) accurately grouped individuals without label information. PCA showed clear separation between phenotypes, consistent with known endocrine patterns. Logistic regression achieved 100 % accuracy, sensitivity, and specificity, with an AUC of 1.00, confirming robust, phenotype-discriminative features in the synthetic dataset.

Conclusion: This simulation framework reproduces physiologically accurate hormone dynamics and discriminates ovulatory from anovulatory cycles, offering applications in AI training, phenotype discovery, and medical education.

模拟生殖内分泌学中多激素动力学的半机械数学框架。
背景:卵巢激素的动态相互作用是生殖生理学的核心,但其周期变化的复杂性对分析、模拟和教学提出了挑战。本研究提出了一个框架,用于生成生理受限的多激素合成时间序列,以捕获跨表型的个体内和个体间变异性。方法:我们开发了一个半机械的数学框架来生成合成的多激素谱(雌二醇,FSH, LH, AMH,睾酮,GnRH),使用嵌入已知生理反馈的参数方程(例如,雌二醇-LH延迟,雌二醇抑制FSH)。随机分量被校准到报告的生理范围。通过参数调整定义痛经和pcos样表型。使用主成分分析(PCA)对数据进行表型分离分析,并在监督设置中使用逻辑回归与分层训练/测试分离,报告准确性,敏感性,特异性和ROC AUC进行评估。结果:月经初潮表现为典型的周期中期雌二醇和LH峰值,FSH双相,AMH和睾酮水平稳定。相比之下,多囊卵巢综合征表现为LH和睾酮升高,AMH升高,雌二醇钝化,GnRH搏动失调。PCA显示表型之间有明显的分离(PC1 +PC2 = 82 %方差),k-means聚类(k = 2)在没有标签信息的情况下准确地将个体分组。PCA显示表型之间有明显的分离,与已知的内分泌模式一致。逻辑回归达到了100% %的准确度、灵敏度和特异性,AUC为1.00,证实了合成数据集中稳健的、表型区分的特征。结论:该模拟框架再现了生理上准确的激素动态,并区分了排卵周期和不排卵周期,可用于人工智能训练、表型发现和医学教育。
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来源期刊
Computational and structural biotechnology journal
Computational and structural biotechnology journal Biochemistry, Genetics and Molecular Biology-Biophysics
CiteScore
9.30
自引率
3.30%
发文量
540
审稿时长
6 weeks
期刊介绍: Computational and Structural Biotechnology Journal (CSBJ) is an online gold open access journal publishing research articles and reviews after full peer review. All articles are published, without barriers to access, immediately upon acceptance. The journal places a strong emphasis on functional and mechanistic understanding of how molecular components in a biological process work together through the application of computational methods. Structural data may provide such insights, but they are not a pre-requisite for publication in the journal. Specific areas of interest include, but are not limited to: Structure and function of proteins, nucleic acids and other macromolecules Structure and function of multi-component complexes Protein folding, processing and degradation Enzymology Computational and structural studies of plant systems Microbial Informatics Genomics Proteomics Metabolomics Algorithms and Hypothesis in Bioinformatics Mathematical and Theoretical Biology Computational Chemistry and Drug Discovery Microscopy and Molecular Imaging Nanotechnology Systems and Synthetic Biology
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