{"title":"Targeting Hsp27 inhibition in Glioblastoma: A comprehensive in silico investigation","authors":"Emmanuel Amarachi Iwuchukwu, Ikechukwu Achilonu","doi":"10.1016/j.jmgm.2025.109132","DOIUrl":null,"url":null,"abstract":"<div><div>Glioblastoma (GBM) overexpresses heat shock protein 27 (HSP27), which enhances androgen receptor (AR) transcriptional activity. Inhibiting HSP27 can block AR signaling, offering a potential therapeutic approach for GBM. Computer analysis of structural dynamics showed that lead-optimized COMP2 and COMP3 had enhanced activity compared to COMP1, the positive control and the negative control. The re-docked ligand alignment confirms docking accuracy, while structural analysis shows that compound binding disrupts Hsp27's 3D structure, suggesting inhibition. A critical look at the ligand-bound amino acid behavior suggests slight rigidity relative to the apo, thus suggesting inactivation. Recurring observations suggest that Arg140, Arg136 and His103 are crucial for binding stabilization in the first pocket, whereas when COMP2 migrates to the second pocket, Thr143 appears to be more prominent for binding stabilization. An estimated G<sub>bind</sub> of −31.59 ± 6.34 kcal/mol and −33.61 ± 4.09 kcal/mol was obtained for COMP1 and COMP3, respectively, whereas COMP21st and COMP2nd exhibited a G<sub>bind</sub> of −21.96 ± 8.16 kcal/mol and −18.36 ± 5.76 kcal/mol, the positive control is −19.60 ± 4.74 and the negative control −8.45 ± 3.23; the reduction in the energy value of COMP2 in the second pocket could be due to shared pocket binding. The study suggests that COMP2 acts as a dual binder, and results from positive and negative controls indicate that the tested compounds could be HSP27 inhibitors. These compounds show promise as drug-like candidates based on pharmacokinetic and physicochemical evaluations. The findings support the development of novel HSP27 inhibitors to effectively block GLM.</div></div>","PeriodicalId":16361,"journal":{"name":"Journal of molecular graphics & modelling","volume":"141 ","pages":"Article 109132"},"PeriodicalIF":3.0000,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of molecular graphics & modelling","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1093326325001925","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Glioblastoma (GBM) overexpresses heat shock protein 27 (HSP27), which enhances androgen receptor (AR) transcriptional activity. Inhibiting HSP27 can block AR signaling, offering a potential therapeutic approach for GBM. Computer analysis of structural dynamics showed that lead-optimized COMP2 and COMP3 had enhanced activity compared to COMP1, the positive control and the negative control. The re-docked ligand alignment confirms docking accuracy, while structural analysis shows that compound binding disrupts Hsp27's 3D structure, suggesting inhibition. A critical look at the ligand-bound amino acid behavior suggests slight rigidity relative to the apo, thus suggesting inactivation. Recurring observations suggest that Arg140, Arg136 and His103 are crucial for binding stabilization in the first pocket, whereas when COMP2 migrates to the second pocket, Thr143 appears to be more prominent for binding stabilization. An estimated Gbind of −31.59 ± 6.34 kcal/mol and −33.61 ± 4.09 kcal/mol was obtained for COMP1 and COMP3, respectively, whereas COMP21st and COMP2nd exhibited a Gbind of −21.96 ± 8.16 kcal/mol and −18.36 ± 5.76 kcal/mol, the positive control is −19.60 ± 4.74 and the negative control −8.45 ± 3.23; the reduction in the energy value of COMP2 in the second pocket could be due to shared pocket binding. The study suggests that COMP2 acts as a dual binder, and results from positive and negative controls indicate that the tested compounds could be HSP27 inhibitors. These compounds show promise as drug-like candidates based on pharmacokinetic and physicochemical evaluations. The findings support the development of novel HSP27 inhibitors to effectively block GLM.
期刊介绍:
The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design.
As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.