Zhiyuan Ouyang , Simei Huang , Liuju Liang , Jianing Xu , Caifen Wei , Yi Zhang , Hancheng Jiang , Haifeng Tang , Lu Wang , Lin Wang , Xiangzhi Li , Zhenbing Liu , Ruojie Zhang , Lian Qin , Xiaobo Yang
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引用次数: 0
Abstract
Background:
Over the past three decades, there has been a significant increase in the incidence of thyroid cancer. Ultrasound serves as a non-invasive tool in differentiating between benign and malignant thyroid nodules. However, its reliance on manual input can often lead to subjective bias.
Purpose:
This study proposes a novel network architecture committed to diminishing subjective bias led by manual masks and enhancing the accuracy of the current models. It amalgamates multi-scale features for the effective classification of thyroid nodules.
Methods:
The innovative model, deemed APSNet, finds inspiration from active and passive systems. It incorporates attention mechanisms to augment nodule recognition. The model underwent training on a localized ultrasound image dataset and was tested using an external datasets TDID and TN3K. The assessment of its performance involved metrics such as Dice, IoU, F1, Acc, Sen, Spe, Ppv, Npv, and AUC, followed by statistical tests including the Friedman and DeLong tests.
Results:
APSNet outperformed existing models across multiple metrics, achieving an Acc of 0.9259, F1 score of 0.9540, and AUC of 0.9243 on the TDID dataset, and an Acc of 0.9287, F1 score of 0.9001, sensitivity of 0.9273, and AUC of 0.9290 on the TN3K dataset. The DeLong test confirmed its superiority, indicating statistically significant improvements over other models. Ablation Study confirms the effectiveness of Dual-System design and the potention of Transformer-based backbone.
Conclusions:
APSNet offers a remarkable stride forward in thyroid nodule diagnosis by effectively addressing subjectivity and amplifying feature extraction capabilities. It proffers a more accurate and dependable diagnostic tool to clinicians.
期刊介绍:
Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered.
Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered.
Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.