Leveraging Unstructured Data in Electronic Health Records to Detect Adverse Events from Pediatric Drug Use: A Scoping Review.

IF 8.1 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Su Golder, Karen O'Connor, Guillermo Lopez-Garcia, Nicholas P Tatonetti, Graciela Gonzalez-Hernandez
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引用次数: 0

Abstract

Adverse drug events (ADEs) in pediatric populations pose significant public health challenges, yet research on their detection and monitoring remains limited. This scoping review evaluates the use of unstructured data from electronic health records (EHRs) to identify ADEs in children. We searched six databases, including MEDLINE, Embase, and IEEE Xplore, in September 2024. From 984 records, only nine studies met our inclusion criteria, indicating a significant gap in research toward identifying ADEs in children. We found that unstructured data in EHRs can indeed be of value and enhance pediatric pharmacovigilance, although their use has been so far very limited. Traditional natural language processing methods have been employed to extract ADEs, but the approaches utilized face challenges in generalizability and context interpretation. These challenges could be addressed with recent advances in transformer-based models and large language models, unlocking the use of EHR data at scale for pediatric pharmacovigilance.

利用电子健康记录中的非结构化数据来检测儿童药物使用的不良事件:范围审查。
儿科人群的药物不良事件(ADEs)构成了重大的公共卫生挑战,但对其检测和监测的研究仍然有限。本综述评估了使用电子健康记录(EHRs)中的非结构化数据来识别儿童ade的情况。我们在2024年9月检索了六个数据库,包括MEDLINE、Embase和IEEE explore。从984项记录中,只有9项研究符合我们的纳入标准,这表明在识别儿童ADEs方面的研究存在显著差距。我们发现电子病历中的非结构化数据确实有价值,可以提高儿科药物警惕性,尽管迄今为止它们的使用非常有限。传统的自然语言处理方法被用来提取ade,但所使用的方法在泛化和上下文解释方面面临挑战。这些挑战可以通过基于转换器的模型和大型语言模型的最新进展来解决,从而实现大规模使用电子病历数据用于儿科药物警戒。
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来源期刊
CiteScore
11.10
自引率
1.70%
发文量
0
期刊介绍: The Annual Review of Biomedical Data Science provides comprehensive expert reviews in biomedical data science, focusing on advanced methods to store, retrieve, analyze, and organize biomedical data and knowledge. The scope of the journal encompasses informatics, computational, artificial intelligence (AI), and statistical approaches to biomedical data, including the sub-fields of bioinformatics, computational biology, biomedical informatics, clinical and clinical research informatics, biostatistics, and imaging informatics. The mission of the journal is to identify both emerging and established areas of biomedical data science, and the leaders in these fields.
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