Artificial intelligence-based fully automatic 3D paranasal sinus segmentation.

IF 4 2区 医学 Q1 DENTISTRY, ORAL SURGERY & MEDICINE
Meryem Kaygısız Yiğit, Alp Pınarbaşı, Meryem Etöz, Şuayip Burak Duman, İbrahim Şevki Bayrakdar
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引用次数: 0

Abstract

Objectives: Precise 3D segmentation of paranasal sinuses is essential for accurate diagnosis and treatment. This study aimed to develop a fully automated segmentation algorithm for the paranasal sinuses using the nnU-Net v2 architecture.

Methods: The nnU-Net v2-based segmentation algorithm was developed using Python 3.6.1 and the PyTorch library, and its performance was evaluated on a dataset of 97 cone beam CT (CBCT) scans. Ground truth annotations were manually generated by expert radiologists using the 3D Slicer software, employing a polygonal labelling technique across sagittal, coronal, and axial planes. Model performance was assessed using several quantitative metrics, including accuracy, Dice coefficient (DC), sensitivity, precision, Jaccard index, area under the curve (AUC), and 95% Hausdorff distance (95% HD).

Results: The nnU-Net v2-based algorithm demonstrated high segmentation performance across all paranasal sinuses. DC values were 0.94 for the frontal, 0.95 for the sphenoid, 0.97 for the maxillary, and 0.88 for the ethmoid sinuses. Accuracy scores exceeded 99% for all sinuses. The 95% HD values were 0.51 mm for both the frontal and maxillary sinuses, 0.85 mm for the sphenoid sinus, and 1.17 mm for the ethmoid sinus. Jaccard indices were 0.90, 0.91, 0.94, and 0.80, respectively.

Conclusions: This study highlights the high accuracy and precision of the nnU-Net v2-based CNN model in the fully automated segmentation of paranasal sinuses from CBCT images. The results suggest that the proposed model can significantly contribute to clinical decision-making processes, facilitating diagnostic and therapeutic procedures.

基于人工智能的全自动3D鼻窦分割。
目的:精确的鼻窦三维分割是准确诊断和治疗的必要条件。本研究旨在利用nnU-Net v2架构开发一种完全自动化的鼻窦分割算法。方法:基于Python 3.6.1和PyTorch库开发基于nnU-Net v2的分割算法,并在97个锥束ct扫描数据集上对其性能进行评价。地面真相注释是由放射科专家使用3D切片器软件手动生成的,在矢状面、冠状面和轴向面采用多边形标记技术。使用几个定量指标评估模型的性能,包括准确性、Dice系数(DC)、灵敏度、精度、Jaccard指数、曲线下面积(AUC)和95% Hausdorff距离(95% HD)。结果:基于nnU-Net v2的算法在所有鼻窦中表现出较高的分割性能。额骨的Dice Coefficient (DC)值为0.94,蝶窦为0.95,上颌为0.97,筛窦为0.88。所有鼻窦的准确率评分均超过99%。额窦和上颌窦的95% Hausdorff距离(95% HD)均为0.51 mm,蝶窦为0.85 mm,筛窦为1.17 mm。Jaccard指数分别为0.90、0.91、0.94和0.80。结论:本研究突出了基于nnU-Net v2的CNN模型在CBCT图像中鼻窦的全自动分割中具有较高的准确性和精密度。结果表明,所提出的模型可以显著促进临床决策过程,促进诊断和治疗程序。
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来源期刊
CiteScore
5.60
自引率
9.10%
发文量
65
审稿时长
4-8 weeks
期刊介绍: Dentomaxillofacial Radiology (DMFR) is the journal of the International Association of Dentomaxillofacial Radiology (IADMFR) and covers the closely related fields of oral radiology and head and neck imaging. Established in 1972, DMFR is a key resource keeping dentists, radiologists and clinicians and scientists with an interest in Head and Neck imaging abreast of important research and developments in oral and maxillofacial radiology. The DMFR editorial board features a panel of international experts including Editor-in-Chief Professor Ralf Schulze. Our editorial board provide their expertise and guidance in shaping the content and direction of the journal. Quick Facts: - 2015 Impact Factor - 1.919 - Receipt to first decision - average of 3 weeks - Acceptance to online publication - average of 3 weeks - Open access option - ISSN: 0250-832X - eISSN: 1476-542X
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