Exploring virus-host interactions through combined proteomic approaches identifies BANF1 as a new essential factor for African Swine Fever Virus.

IF 6.1 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Juliette Dupré, Katarzyna Magdalena Dolata, Gang Pei, Aidin Molouki, Lynnette C Goatley, Richard Küchler, Timothy K Soh, Jens B Bosse, Aurore Fablet, Mireille Le Dimna, Grégory Karadjian, Edouard Hirchaud, Christopher L Netherton, Linda K Dixon, Ana Luisa Reis, Damien Vitour, Marie-Frédérique Le Potier, Axel Karger, Grégory Caignard
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引用次数: 0

Abstract

African swine fever virus (ASFV) causes a lethal disease in pigs and represents a significant threat to the global pork industry due to the lack of effective vaccines or treatments. Despite intensive research, many ASFV proteins remain uncharacterized. This study aimed to elucidate the functions of two ASFV proteins, pMGF360-21R and pA151R, through comprehensive analysis of their interactions with host proteins. Using affinity purification-mass spectrometry and yeast two-hybrid screening approaches, we identified the host protein barrier-to-autointegration factor 1 (BANF1) as a key interactor of both viral proteins. Biochemical and colocalization assays confirmed these interactions and demonstrated that MGF360-21R and A151R expression leads to cytoplasmic relocation of BANF1. Functionally, BANF1 silencing significantly reduced ASFV replication, indicating its proviral role. Given BANF1's established function in regulating the cGAS/STING-dependent type I interferon (IFN-I) response, we postulated that A151R and MGF360-21R could inhibit this pathway. Using different strategies, we showed that both A151R and MGF360-21R did indeed inhibit IFN-I induction. Generation of ASFV deficient of A151R or MGF360-21R showed that both mutant viruses enhanced the host IFN response in primary porcine macrophages compared to wild-type virus. However, their capacity to inhibit this pathway could occur through mechanisms independent of BANF1. Proteomic analysis of BANF1 interactors during ASFV infection highlighted potentially roles in chromatin remodeling, nuclear transport, and innate immune response pathways. Altogether, our data provide new insights into ASFV-host interactions, identifying BANF1 as an important new host factor required for replication and uncovering novel functions for A151R and MGF360-21R.

通过联合蛋白质组学方法探索病毒与宿主的相互作用,确定BANF1是非洲猪瘟病毒的一个新的重要因子。
非洲猪瘟病毒(ASFV)在猪中引起致命疾病,由于缺乏有效的疫苗或治疗方法,对全球猪肉产业构成重大威胁。尽管进行了深入的研究,但许多ASFV蛋白仍未被表征。本研究旨在通过综合分析pMGF360-21R和pA151R两种ASFV蛋白与宿主蛋白的相互作用,阐明它们的功能。利用亲和纯化-质谱法和酵母双杂交筛选方法,我们发现宿主蛋白自整合障碍因子1 (BANF1)是这两种病毒蛋白的关键相互作用因子。生化和共定位实验证实了这些相互作用,并证明MGF360-21R和A151R的表达导致BANF1的细胞质重新定位。功能上,BANF1沉默显著减少ASFV的复制,表明其在病毒前的作用。鉴于BANF1在调节cGAS/ sting依赖性I型干扰素(IFN-I)应答中的既定功能,我们假设A151R和MGF360-21R可以抑制这一途径。使用不同的策略,我们发现A151R和MGF360-21R确实抑制了IFN-I的诱导。产生缺乏A151R或MGF360-21R的ASFV表明,与野生型病毒相比,这两种突变病毒都增强了原代猪巨噬细胞对宿主IFN的反应。然而,它们抑制这一途径的能力可能通过独立于BANF1的机制发生。ASFV感染过程中BANF1相互作用物的蛋白质组学分析强调了在染色质重塑、核转运和先天免疫反应途径中的潜在作用。总之,我们的数据为asfv -宿主相互作用提供了新的见解,确定了BANF1是复制所需的重要新宿主因子,并揭示了A151R和MGF360-21R的新功能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics 生物-生化研究方法
CiteScore
11.50
自引率
4.30%
发文量
131
审稿时长
84 days
期刊介绍: The mission of MCP is to foster the development and applications of proteomics in both basic and translational research. MCP will publish manuscripts that report significant new biological or clinical discoveries underpinned by proteomic observations across all kingdoms of life. Manuscripts must define the biological roles played by the proteins investigated or their mechanisms of action. The journal also emphasizes articles that describe innovative new computational methods and technological advancements that will enable future discoveries. Manuscripts describing such approaches do not have to include a solution to a biological problem, but must demonstrate that the technology works as described, is reproducible and is appropriate to uncover yet unknown protein/proteome function or properties using relevant model systems or publicly available data. Scope: -Fundamental studies in biology, including integrative "omics" studies, that provide mechanistic insights -Novel experimental and computational technologies -Proteogenomic data integration and analysis that enable greater understanding of physiology and disease processes -Pathway and network analyses of signaling that focus on the roles of post-translational modifications -Studies of proteome dynamics and quality controls, and their roles in disease -Studies of evolutionary processes effecting proteome dynamics, quality and regulation -Chemical proteomics, including mechanisms of drug action -Proteomics of the immune system and antigen presentation/recognition -Microbiome proteomics, host-microbe and host-pathogen interactions, and their roles in health and disease -Clinical and translational studies of human diseases -Metabolomics to understand functional connections between genes, proteins and phenotypes
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