Experimental and computational study of a hybrid phosphate crystal exhibiting a wide energy band gap: Structural, optical, and insight from Hirshfeld surface analysis and DFT calculations
{"title":"Experimental and computational study of a hybrid phosphate crystal exhibiting a wide energy band gap: Structural, optical, and insight from Hirshfeld surface analysis and DFT calculations","authors":"Abdellatif Rafik , Zari Rkia , Miha Lukšič , Hafid Zouihri , Burak Tüzün","doi":"10.1016/j.ssc.2025.116073","DOIUrl":null,"url":null,"abstract":"<div><div>The crystal structure of C<sub>4</sub>H<sub>10</sub>NO<sub>3</sub><sup>+</sup>.H<sub>2</sub>PO<sub>4</sub><sup>−</sup> reveals a three-dimensional hydrogen-bonded network composed of dihydrogen phosphate anions, carboxyl groups, and ammonium groups, the molecular geometry of DLTDP was optimized using Becke's three-parameter hybrid functional, the Lee-Yang-Parr correlation functional (B3LYP) theory, and the 6-311G basis set. Additionally, fingerprint plots derived from the Hirshfeld surface were employed to explore the crystal's intermolecular interactions and the compound, H⋯H contacts appear as asymmetrically scattered dots, covering a large area of the two-dimensional FP maps, with a single broad peak at de = di ∼ 1.2 Å and a significant contribution of 33.6 %. O⋯H/H⋯O contacts, However, the volume occupied by these voids represents about 9.56 % of the volume of the unit cell. The nonlinear optical (NLO) properties of DLTDP were also theoretically predicted. Its electronic properties, including HOMO and LUMO energies, were computed to assess the charge transfer characteristics. Local reactivity descriptors, such as electrophilicity indices, were used to identify the most reactive sites. To investigate the electronic structure and intra/intermolecular charge transfer within the DLTDP molecule, Natural Bond Orbital (NBO) analysis was employed. This approach provided detailed insights into donor–acceptor interactions and the stabilization energies associated with electron delocalization. The nucleophilic and electrophilic regions were determined through molecular electrostatic potential (MEP) mapping and Fukui function analysis. The IR spectra exhibited a broad absorption band around 2350 cm<sup>−1</sup>, attributed to the O–H stretching vibration of the H<sub>2</sub>PO<sub>4</sub><sup>−</sup> group, indicating the formation of hydrogen bonds between H<sub>2</sub>PO<sub>4</sub><sup>−</sup> anions and N–H groups. In addition, the interaction of the investigated compound with COVID-19 target proteins was studied. Molecular dynamics simulations were performed over a time scale of 0–100 ns to analyze its interaction with the protein exhibiting the lowest docking energy. Finally, the DLTDP crystal showed an optical band gap of 5.87 ± 0.01 eV, indicating its potential suitability for optical applications due to its wide band gap.</div></div>","PeriodicalId":430,"journal":{"name":"Solid State Communications","volume":"404 ","pages":"Article 116073"},"PeriodicalIF":2.1000,"publicationDate":"2025-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Solid State Communications","FirstCategoryId":"101","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0038109825002480","RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PHYSICS, CONDENSED MATTER","Score":null,"Total":0}
引用次数: 0
Abstract
The crystal structure of C4H10NO3+.H2PO4− reveals a three-dimensional hydrogen-bonded network composed of dihydrogen phosphate anions, carboxyl groups, and ammonium groups, the molecular geometry of DLTDP was optimized using Becke's three-parameter hybrid functional, the Lee-Yang-Parr correlation functional (B3LYP) theory, and the 6-311G basis set. Additionally, fingerprint plots derived from the Hirshfeld surface were employed to explore the crystal's intermolecular interactions and the compound, H⋯H contacts appear as asymmetrically scattered dots, covering a large area of the two-dimensional FP maps, with a single broad peak at de = di ∼ 1.2 Å and a significant contribution of 33.6 %. O⋯H/H⋯O contacts, However, the volume occupied by these voids represents about 9.56 % of the volume of the unit cell. The nonlinear optical (NLO) properties of DLTDP were also theoretically predicted. Its electronic properties, including HOMO and LUMO energies, were computed to assess the charge transfer characteristics. Local reactivity descriptors, such as electrophilicity indices, were used to identify the most reactive sites. To investigate the electronic structure and intra/intermolecular charge transfer within the DLTDP molecule, Natural Bond Orbital (NBO) analysis was employed. This approach provided detailed insights into donor–acceptor interactions and the stabilization energies associated with electron delocalization. The nucleophilic and electrophilic regions were determined through molecular electrostatic potential (MEP) mapping and Fukui function analysis. The IR spectra exhibited a broad absorption band around 2350 cm−1, attributed to the O–H stretching vibration of the H2PO4− group, indicating the formation of hydrogen bonds between H2PO4− anions and N–H groups. In addition, the interaction of the investigated compound with COVID-19 target proteins was studied. Molecular dynamics simulations were performed over a time scale of 0–100 ns to analyze its interaction with the protein exhibiting the lowest docking energy. Finally, the DLTDP crystal showed an optical band gap of 5.87 ± 0.01 eV, indicating its potential suitability for optical applications due to its wide band gap.
期刊介绍:
Solid State Communications is an international medium for the publication of short communications and original research articles on significant developments in condensed matter science, giving scientists immediate access to important, recently completed work. The journal publishes original experimental and theoretical research on the physical and chemical properties of solids and other condensed systems and also on their preparation. The submission of manuscripts reporting research on the basic physics of materials science and devices, as well as of state-of-the-art microstructures and nanostructures, is encouraged.
A coherent quantitative treatment emphasizing new physics is expected rather than a simple accumulation of experimental data. Consistent with these aims, the short communications should be kept concise and short, usually not longer than six printed pages. The number of figures and tables should also be kept to a minimum. Solid State Communications now also welcomes original research articles without length restrictions.
The Fast-Track section of Solid State Communications is the venue for very rapid publication of short communications on significant developments in condensed matter science. The goal is to offer the broad condensed matter community quick and immediate access to publish recently completed papers in research areas that are rapidly evolving and in which there are developments with great potential impact.