Rapid method for evaluation of CK2 enzymatic activity and CK2α/CK2β-interaction in Escherichia coli cell lysates.

IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Biological Chemistry Pub Date : 2025-06-17 Print Date: 2025-03-26 DOI:10.1515/hsz-2024-0159
Alexander Gast, Sebastian Schreiber, Joachim Jose
{"title":"Rapid method for evaluation of CK2 enzymatic activity and CK2α/CK2β-interaction in <i>Escherichia coli</i> cell lysates.","authors":"Alexander Gast, Sebastian Schreiber, Joachim Jose","doi":"10.1515/hsz-2024-0159","DOIUrl":null,"url":null,"abstract":"<p><p>This study introduces a novel, rapid assay to measure CK2α activity in <i>Escherichia coli</i> cell lysates. By fusing CK2α with the fluorescent protein mScarlet it was possible to quantify CK2α concentration directly in lysates. We used the dose-dependent increase of CK2α activity after addition of CK2β<sup>1-193</sup> to determine the dissociation constants (<i>K</i> <sub><i>D</i></sub> ) of the CK2α/CK2β-interaction. As a first trial, activity and affinity of the variant CK2α<sup>R191Q</sup> to CK2β<sup>1-193</sup> was investigated using the developed assays. This mutation in the <i>CSNK2A1</i> gene, encoding CK2α is related to the Okur-Chung Neurodevelopmental Syndrome (OCNDS). Apparent <i>K</i> <sub><i>D</i></sub> values of 13 nM for the CK2α<sup>R191Q</sup>/CK2β interaction and 7.4 nM for the CK2α/CK2β interaction were determined using nonlinear regression. Uncertainties with regards to the concentration of both binding partners were propagated through the entire process of nonlinear regression by Monte Carlo simulations. This way, accuracy confidence intervals of the <i>K</i> <sub><i>D</i></sub> -values were derived. This resulted in 96.4 % confidence that the accurate <i>K</i> <sub><i>D</i></sub> -values of the CK2α-CK2β and CK2α<sup>R191Q</sup>-CK2β interactions were different. The results suggest potential disruptions in oligomeric assembly caused by the R191Q mutation.</p>","PeriodicalId":8885,"journal":{"name":"Biological Chemistry","volume":"406 3-4","pages":"117-124"},"PeriodicalIF":2.9000,"publicationDate":"2025-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biological Chemistry","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1515/hsz-2024-0159","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/26 0:00:00","PubModel":"Print","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

This study introduces a novel, rapid assay to measure CK2α activity in Escherichia coli cell lysates. By fusing CK2α with the fluorescent protein mScarlet it was possible to quantify CK2α concentration directly in lysates. We used the dose-dependent increase of CK2α activity after addition of CK2β1-193 to determine the dissociation constants (K D ) of the CK2α/CK2β-interaction. As a first trial, activity and affinity of the variant CK2αR191Q to CK2β1-193 was investigated using the developed assays. This mutation in the CSNK2A1 gene, encoding CK2α is related to the Okur-Chung Neurodevelopmental Syndrome (OCNDS). Apparent K D values of 13 nM for the CK2αR191Q/CK2β interaction and 7.4 nM for the CK2α/CK2β interaction were determined using nonlinear regression. Uncertainties with regards to the concentration of both binding partners were propagated through the entire process of nonlinear regression by Monte Carlo simulations. This way, accuracy confidence intervals of the K D -values were derived. This resulted in 96.4 % confidence that the accurate K D -values of the CK2α-CK2β and CK2αR191Q-CK2β interactions were different. The results suggest potential disruptions in oligomeric assembly caused by the R191Q mutation.

快速评价大肠杆菌细胞裂解物中CK2酶活性和CK2α/CK2β相互作用的方法
本研究介绍了一种新的快速测定大肠杆菌细胞裂解物中CK2α活性的方法。通过将CK2α与荧光蛋白mScarlet融合,可以直接测定裂解物中CK2α的浓度。我们使用添加CK2β1-193后CK2α活性的剂量依赖性增加来确定CK2α/ ck2 β-相互作用的解离常数(K D)。作为第一次试验,我们利用开发的方法研究了CK2αR191Q变异对CK2β1-193的活性和亲和力。编码CK2α的CSNK2A1基因突变与Okur-Chung神经发育综合征(OCNDS)有关。采用非线性回归法测定CK2α r191q /CK2β相互作用的表观K D值为13 nM, CK2α/CK2β相互作用的表观K D值为7.4 nM。通过蒙特卡罗模拟,将两个结合伙伴浓度的不确定性贯穿于整个非线性回归过程。通过这种方法,导出了K - D值的精度置信区间。这使得CK2α-CK2β和CK2αR191Q-CK2β相互作用的准确K D值有96.4 %的置信度。结果表明,R191Q突变可能导致低聚物组装的中断。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biological Chemistry
Biological Chemistry 生物-生化与分子生物学
CiteScore
7.20
自引率
0.00%
发文量
63
审稿时长
4-8 weeks
期刊介绍: Biological Chemistry keeps you up-to-date with all new developments in the molecular life sciences. In addition to original research reports, authoritative reviews written by leading researchers in the field keep you informed about the latest advances in the molecular life sciences. Rapid, yet rigorous reviewing ensures fast access to recent research results of exceptional significance in the biological sciences. Papers are published in a "Just Accepted" format within approx.72 hours of acceptance.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信