Functional characterization of promoter regions in selenoprotein synthesis-relevant genes (sbp2, eefsec and sepsecs) and their selenium-dependent regulation in yellow catfish Pelteobagrus fulvidraco

IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Kai Zhang , An-Gen Yu , Hua Zheng , Pei-Jia Li , Zhi Luo
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引用次数: 0

Abstract

The study explored the transcriptional regulation of selenoprotein synthesis-relevant genes, such as selenocysteine insertion sequence element binding protein 2 (sbp2), eukaryotic elongation factor (eefsec) and o-phosphoserine selenocysteine tRNA synthase (sepsecs), and their selenium-mediated regulation in yellow catfish Pelteobagrus fulvidraco, an important fish with ecological and economic importance in several Asian countries. We cloned the sequences of sbp2, eefsec and sepsecs promoters, spanning from −2060 bp to +61 bp, −1910 bp to +53 bp and − 1456 bp to +51 bp relative to the TSS, respectively. Through sequential deletion and mutation analysis of their promoters, we identified several functional binding sites: the signal transducer and activator of transcription 1 (STAT1) binding site (−1308 bp to −1322 bp) and the forkhead box protein O1 (FOXO1) binding site (−1778 bp to −1788 bp) in the sbp2 promoter; the FOXO1 binding site (−1070 bp to −1080 bp) and the STAT3 binding site (−428 bp to −436 bp) in the eefsec promoter; and the FOXO1 binding site (−721 bp to −731 bp) in the sepsecs promoter. The activity of these binding sites was regulated by selenomethionine (Se-Met) incubation. Furthermore, electrophoretic mobility shift assay and chromatin immunoprecipitation experiments confirmed that these binding sites interact with their corresponding transcription factors above. For the first time, we demonstrated that STAT1 and FOXO1 regulate transcriptional activity of sbp2 promoter; STAT3 and FOXO1 regulate transcriptional activity of eefsec promoter; and FOXO1 regulates transcriptional activity of sepsecs promoter. These findings provide novel insights into regulatory mechanisms of selenoprotein synthesis in yellow catfish.
黄颡鱼硒蛋白合成相关基因(sbp2、eefsec和sepsecs)启动子区功能特征及其硒依赖性调控
本研究探讨了硒蛋白合成相关基因,如硒氨酸半胱氨酸插入序列元件结合蛋白2 (sbp2)、真核延伸因子(eefsec)和磷酸丝氨酸硒氨酸半胱氨酸tRNA合酶(sepsecs)在黄颡鱼(Pelteobagrus fulvidraco)中的转录调控及其硒介导的调控。黄颡鱼是亚洲一些国家重要的生态和经济鱼类。我们克隆了sbp2、eefsec和sepsecs启动子的序列,相对于TSS分别为-2060 bp至+61 bp、-1910 bp至+53 bp和 - 1456 bp至+51 bp。通过对其启动子的序列删除和突变分析,我们确定了几个功能结合位点:sbp2启动子中的转录信号转换器和激活子1 (STAT1)结合位点(-1308 bp至-1322 bp)和叉头盒蛋白O1 (FOXO1)结合位点(-1778 bp至-1788 bp);eefsec启动子中的FOXO1结合位点(-1070 bp ~ -1080 bp)和STAT3结合位点(-428 bp ~ -436 bp);sepsecs启动子中的FOXO1结合位点(-721 bp至-731 bp)。硒代蛋氨酸(Se-Met)孵育可调节这些结合位点的活性。此外,电泳迁移率转移实验和染色质免疫沉淀实验证实了这些结合位点与上述相应的转录因子相互作用。我们首次证实STAT1和FOXO1调控sbp2启动子的转录活性;STAT3和fox01调控eefsec启动子的转录活性;fox01调控sepsecs启动子的转录活性。这些发现为黄鲶鱼硒蛋白合成的调控机制提供了新的见解。
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来源期刊
CiteScore
9.20
自引率
2.10%
发文量
63
审稿时长
44 days
期刊介绍: BBA Gene Regulatory Mechanisms includes reports that describe novel insights into mechanisms of transcriptional, post-transcriptional and translational gene regulation. Special emphasis is placed on papers that identify epigenetic mechanisms of gene regulation, including chromatin, modification, and remodeling. This section also encompasses mechanistic studies of regulatory proteins and protein complexes; regulatory or mechanistic aspects of RNA processing; regulation of expression by small RNAs; genomic analysis of gene expression patterns; and modeling of gene regulatory pathways. Papers describing gene promoters, enhancers, silencers or other regulatory DNA regions must incorporate significant functions studies.
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