A novel method for reliably measuring miniature and spontaneous postsynaptic events in whole-cell patch clamp recordings in the central nervous system.

IF 4.2 3区 医学 Q2 NEUROSCIENCES
Frontiers in Cellular Neuroscience Pub Date : 2025-06-18 eCollection Date: 2025-01-01 DOI:10.3389/fncel.2025.1598016
Martynas Dervinis, Guy Major
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引用次数: 0

Abstract

Measurements of miniature postsynaptic currents (mPSCs) or potentials (mPSPs) in the soma of neurons of the central nervous system (CNS) provide a way of quantifying the synaptic function at the network level and, therefore, are routine in the neurophysiology literature. These miniature responses (or minis) are thought to be elicited by the spontaneous release of a single neurotransmitter vesicle, also called a quantum. As such, their measurement at the soma can potentially offer a technically straightforward way of estimating "quantal sizes" of central synapses. However, popular methods for detecting minis in whole-cell recordings fall short of being able to reliably distinguish them from background physiological noise. This issue has received very limited attention in the literature, and its scope as well as the relative performance of existing algorithms have not been quantified. As a result, solutions for reliably measuring the quantal size in somatic recordings also do not exist. As the first step in proposing and testing a potential solution, we developed and described a novel miniature postsynaptic event detection algorithm as part of our quantal analysis software called "minis". We tested its performance in detecting real and simulated minis in whole-cell recordings from pyramidal neurons in rat neocortical slices and compared it to two of the most-used mini detection algorithms. This benchmarking revealed superior detection by our algorithm. The release version of the algorithm also offers great flexibility via graphical and programming interfaces.

一种可靠测量中枢神经系统全细胞膜片钳记录中微小和自发突触后事件的新方法。
测量中枢神经系统(CNS)神经元体细胞中的微型突触后电流(mPSCs)或电位(mPSPs)提供了一种在网络水平上量化突触功能的方法,因此在神经生理学文献中是常规的。这些微小的反应被认为是由单个神经递质囊泡(也称为量子)的自发释放引起的。因此,他们在体细胞上的测量可能提供一种技术上直接的方法来估计中枢突触的“量子大小”。然而,在全细胞记录中检测微小信号的流行方法无法可靠地将它们与背景生理噪声区分开来。这个问题在文献中得到的关注非常有限,其范围以及现有算法的相对性能都没有被量化。因此,在体细胞记录中可靠测量量子大小的解决方案也不存在。作为提出和测试潜在解决方案的第一步,我们开发并描述了一种新的微型突触后事件检测算法,作为我们称为“minis”的量子分析软件的一部分。我们测试了它在大鼠新皮质切片锥体神经元全细胞记录中检测真实和模拟小细胞的性能,并将其与两种最常用的小细胞检测算法进行了比较。这种基准测试表明,我们的算法具有优越的检测能力。该算法的发布版本还通过图形和编程接口提供了极大的灵活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
7.90
自引率
3.80%
发文量
627
审稿时长
6-12 weeks
期刊介绍: Frontiers in Cellular Neuroscience is a leading journal in its field, publishing rigorously peer-reviewed research that advances our understanding of the cellular mechanisms underlying cell function in the nervous system across all species. Specialty Chief Editors Egidio D‘Angelo at the University of Pavia and Christian Hansel at the University of Chicago are supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.
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