Quantifying Sample Representation in Global Pharmacogenomic Studies of Major Depressive Disorder: A Systematic Review

IF 2.8 3区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL
Linsey Jackson, Karina Delaney, Justin Bobo, Caroline W. Grant, Leslie Hassett, Liewei Wang, Richard Weinshilboum, Paul E. Croarkin, Ann Moyer, Melanie T. Gentry, Arjun P. Athreya
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Abstract

Major depressive disorder (MDD) is a substantial public health challenge. Pharmacogenomics (PGx), which identifies genetic variations that predict drug treatment outcomes, may have utility for clinical practice, but adequate representation of all populations is needed. As precision medicine in psychiatry moves towards the use of Artificial Intelligence (AI) and Machine Learning (ML) to predict treatment outcomes using PGx data, representation of diverse populations will be especially important in order to mitigate algorithmic bias and achieve equitable and generalizable findings. This work sought to quantify population diversity in pharmacogenomic studies of MDD through a systematic review. Data from 390 MDD antidepressant PGx studies were extracted from 5739 articles screened. Studies summarized were predominantly conducted in Europe, East Asia, and North America. Across all global studies, the study population comprised 57.3% White, 36.4% Asian, 1.7% Black, 3.5% Hispanic/Latino, and 0.1% Native American or Indigenous participants. Only sixty-three (16.2%) studies included Black or Latino/Hispanic patients. Additionally, Black, Asian, Hispanic/Latino, and American Indian/Alaska Native populations were statistically underrepresented in U.S. study populations when compared to national census data, while Asian and Black populations were underrepresented in the United Kingdom. The overrepresentation of participants from a limited number of countries combined with the underrepresentation of Black and Hispanic/Latino populations could impact the extent to which pharmacogenomic testing and associated AI/ML-based PGx tools could individualize antidepressant medication regimens for treating MDD.

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重性抑郁症全球药物基因组学研究的样本量化:系统综述
重度抑郁症(MDD)是一项重大的公共卫生挑战。药物基因组学(PGx)可以识别预测药物治疗结果的遗传变异,可能对临床实践有用,但需要充分代表所有人群。随着精神病学的精准医学转向使用人工智能(AI)和机器学习(ML)来使用PGx数据预测治疗结果,为了减轻算法偏见并获得公平和可推广的结果,不同人群的代表性将变得尤为重要。本研究试图通过系统回顾来量化MDD药物基因组学研究中的人群多样性。从筛选的5739篇文章中提取了390项MDD抗抑郁药PGx研究的数据。所总结的研究主要在欧洲、东亚和北美进行。在所有的全球研究中,研究人群包括57.3%的白人、36.4%的亚洲人、1.7%的黑人、3.5%的西班牙裔/拉丁裔和0.1%的美洲原住民或土著参与者。只有63项(16.2%)研究包括黑人或拉丁裔/西班牙裔患者。此外,与全国人口普查数据相比,黑人、亚洲人、西班牙裔/拉丁裔和美洲印第安人/阿拉斯加土著人口在美国研究人口中的统计代表性不足,而亚洲和黑人人口在英国的代表性不足。来自有限国家的参与者的代表性过高,加上黑人和西班牙裔/拉丁裔人群的代表性不足,可能会影响药物基因组学测试和相关的基于AI/ ml的PGx工具在多大程度上可以个体化治疗重度抑郁症的抗抑郁药物方案。
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来源期刊
Cts-Clinical and Translational Science
Cts-Clinical and Translational Science 医学-医学:研究与实验
CiteScore
6.70
自引率
2.60%
发文量
234
审稿时长
6-12 weeks
期刊介绍: Clinical and Translational Science (CTS), an official journal of the American Society for Clinical Pharmacology and Therapeutics, highlights original translational medicine research that helps bridge laboratory discoveries with the diagnosis and treatment of human disease. Translational medicine is a multi-faceted discipline with a focus on translational therapeutics. In a broad sense, translational medicine bridges across the discovery, development, regulation, and utilization spectrum. Research may appear as Full Articles, Brief Reports, Commentaries, Phase Forwards (clinical trials), Reviews, or Tutorials. CTS also includes invited didactic content that covers the connections between clinical pharmacology and translational medicine. Best-in-class methodologies and best practices are also welcomed as Tutorials. These additional features provide context for research articles and facilitate understanding for a wide array of individuals interested in clinical and translational science. CTS welcomes high quality, scientifically sound, original manuscripts focused on clinical pharmacology and translational science, including animal, in vitro, in silico, and clinical studies supporting the breadth of drug discovery, development, regulation and clinical use of both traditional drugs and innovative modalities.
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