Genome-wide identification of SWEET gene family and functional analysis of BcSWEET1-2 associated with flowering in flowering Chinese cabbage (Brassica campestris).

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Xinmin Huang, Liming He, Yuyao Chen, Yin Liu, Jinfeng Liu, Guangyuan Lu, Riyuan Chen, Yunna Zhu, Shiwei Song, Qinqin He
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引用次数: 0

Abstract

Background: The bolting and flowering processes are crucial for the yield of stem vegetables and require sugar support. Sugar is synthesized through photosynthesis in the leaves and transported to the stems via transmembrane transport. Brassica campestris (flowering Chinese cabbage) is a unique vegetable that does not require vernalization for flowering and has a distinct flowering regulation mechanism. "Sugars Will Eventually be Exported Transporters" (SWEET), a relatively newly identified group of sugar transporters, play vital roles in plant development. However, the role of B. campestris SWEET (BcSWEET) genes in the growth and development of flowering Chinese cabbage remains to be elucidated.

Results: In this study, 32 BcSWEET genes were identified, which are unevenly distributed across nine chromosomes and classified into four groups based on their homology with Arabidopsis. Significant differences were observed in the physicochemical properties, motif composition, and gene structure of the BcSWEET gene family. However, all BcSWEET proteins are predicted to be localized in the cell membrane. Prediction of transmembrane regions showed that all members contained the MtN3/saliva domain. The BcSWEET promoter regions contain different cis-regulatory elements involved in developmental and hormonal regulation, stress responses, and light-responsive regulation. Expression pattern analysis of the 32 BcSWEET genes revealed that most are associated with reproductive growth in different tissues, with the majority being upregulated in petals and flower buds. BcSWEET1-2 has been confirmed to be localized in the cell membrane and to function as a hexose transporter. Overexpression of BcSWEET1-2 in Arabidopsis promotes stem carbohydrate accumulation, upregulates flowering gene expression, enhances Arabidopsis stem elongation, and advances flowering time.

Conclusions: This study systematically identified the BcSWEET gene family in flowering Chinese cabbage and characterized its physicochemical properties, evolutionary relationships, and expression patterns. Further analysis demonstrated that some BcSWEET gene members may play crucial roles in flowering regulation. These findings provide theoretical guidance for further research on the role of SWEET-induced sugar accumulation in flower development in flowering Chinese cabbage.

开花白菜SWEET基因家族的全基因组鉴定及与开花相关的BcSWEET1-2基因的功能分析
背景:茎类蔬菜的抽苔和开花过程对产量至关重要,需要糖的支持。糖在叶片中通过光合作用合成,并通过跨膜运输运输到茎中。油菜(Brassica campestris)是一种独特的不需要春化就能开花的蔬菜,具有独特的开花调节机制。“糖最终会被输出转运蛋白”(SWEET)是一组相对较新的糖转运蛋白,在植物发育中起着至关重要的作用。然而,B. campestris SWEET (BcSWEET)基因在开花大白菜生长发育中的作用尚不清楚。结果:本研究共鉴定到32个BcSWEET基因,这些基因不均匀分布在9条染色体上,根据与拟南芥的同源性将其分为4组。BcSWEET基因家族的理化性质、基序组成和基因结构均存在显著差异。然而,预计所有BcSWEET蛋白都定位在细胞膜上。跨膜区域预测表明,所有成员都含有MtN3/唾液结构域。BcSWEET启动子区域包含不同的顺式调控元件,参与发育和激素调控、应激反应和光响应调控。对32个BcSWEET基因的表达模式分析显示,大多数基因在不同组织中与生殖生长有关,其中大部分基因在花瓣和花蕾中表达上调。BcSWEET1-2已被证实定位于细胞膜并作为己糖转运体发挥作用。BcSWEET1-2在拟南芥中过表达,促进茎碳水化合物积累,上调开花基因表达,增强拟南芥茎伸长,提前开花时间。结论:本研究系统地鉴定了开花白菜BcSWEET基因家族,并对其理化性质、进化关系和表达模式进行了分析。进一步分析表明,BcSWEET基因的一些成员可能在开花调控中起关键作用。这些发现为进一步研究甜度诱导的糖积累在开花大白菜花发育中的作用提供了理论指导。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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