Confidence-aware adaptive fusion leaning of imbalance multi-modal data for cancer diagnosis and prognosis.

IF 6.7 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS
Ziye Zhang, Shijin Wang, Yuying Huang, XiaoRou Zheng, Shoubin Dong
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引用次数: 0

Abstract

The effective fusion of pathological images and molecular omics holds significant potential for precision medicine. However, pathological and molecular data are highly heterogeneous, and large-scale multi-modal cancer data often suffer from incomplete information. Predicting clinical tasks from such imbalanced multi-modal data presents a major challenge. Therefore, we propose a confidence-aware adaptive fusion framework CAFusion. The framework adopts a modular design, providing independent and flexible modal feature learning modules to capture high-quality features. To address issues of modal imbalance caused by heterogeneous and incomplete modal, we design a confidence-aware method that evaluates the features of each modal and automatically adjusts their weights. To effectively fuse pathological and molecular modals, we propose an adaptive deep network, which features a flexible, non-fixed layer structure that effectively extracts hidden joint information from multi-modal features, ensuring high generalizability. Experiment results demonstrate that the performance of the CAFusion framework outperforms other state-of-the-art methods, both on complete and incomplete datasets. Moreover, the CAFusion framework offers reasonable medical interpretability. The source code is available at GitHub: https://github.com/SCUT-CCNL/CAFusion.

不平衡多模态数据的置信度感知自适应融合学习用于肿瘤诊断和预后。
病理图像和分子组学的有效融合在精准医学中具有重要的潜力。然而,病理和分子数据是高度异质性的,大规模的多模态癌症数据往往存在信息不完整的问题。从这种不平衡的多模态数据预测临床任务提出了重大挑战。因此,我们提出了一个自信感知的自适应融合框架。框架采用模块化设计,提供独立灵活的模态特征学习模块,捕获高质量特征。为了解决由异构和不完整模态引起的模态不平衡问题,我们设计了一种置信度感知方法,该方法可以评估每个模态的特征并自动调整其权重。为了有效地融合病理模式和分子模式,我们提出了一种自适应深度网络,该网络具有灵活的非固定层结构,可以有效地从多模式特征中提取隐藏的联合信息,确保高泛化性。实验结果表明,无论是在完整数据集还是不完整数据集上,CAFusion框架的性能都优于其他最先进的方法。此外,融合框架提供了合理的医学可解释性。源代码可在GitHub: https://github.com/SCUT-CCNL/CAFusion。
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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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