Uncovering the Anti-Herpetic Activity of Anionic Peptides Derived From the Cytoplasmic Domain of Nectin-1.

IF 2.3 Q3 BIOCHEMICAL RESEARCH METHODS
Bioinformatics and Biology Insights Pub Date : 2025-06-21 eCollection Date: 2025-01-01 DOI:10.1177/11779322251344130
Rakesh Rahangdale, Sumit Birangal, Gautham Shenoy, Fayaz Shaik Mohammad, Mukesh Pasupuleti, Raghu Chandrashekar Hariharapura
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引用次数: 0

Abstract

Nectin-1/herpes simplex virus glycoprotein D (HSV gD) interaction is crucial to drive herpes simplex virus (HSV) entry. Polyanions are known to show great potential as antivirals. Thus, we explored a peptide-based biotherapeutic approach and, for the first time, evaluated an anionic peptide derived from nectin-1 designed to bind HSV gD. Peptides enriched in acidic and basic residues were selected and computationally modeled using PEP-FOLD3, PROCHECK, ClusPro 2.0, and Desmond. Their antiviral efficacy was tested through virucidal, cell pretreatment, attachment inhibition, entry inhibition, and cytopathic effect (CPE) inhibition assays using a 10 TCID50 (Tissue Culture Infectious Dose 50%) viral dose. Among 4 designed peptides, C1 and C2 showed strong binding to HSV-1 and HSV-2 gD in molecular dynamic (MD) simulations. Peptide C1 exhibited significant virucidal activity (HSV-1: 64.92%, HSV-2: 67.16%), attachment inhibition (HSV-1: 62.03%, HSV-2: 59.38%), and host cell-entry inhibition (HSV-1: 71.37%, HSV-2: 76.28%) at 250 µg/mL concentration. Combination treatment with peptides C1 and C2 at a final concentration of 250 µg/mL (125 µg/mL each) exhibited an additive effect against HSV-1 (68.57%) and HSV-2 (73.37%) infections when tested by CPE inhibition assay. This highlights the potential of HSV gD-targeted anionic peptides for future anti-HSV therapeutics.

揭示从Nectin-1细胞质结构域衍生的阴离子肽的抗疱疹活性。
连接蛋白-1/单纯疱疹病毒糖蛋白D (HSV - gD)相互作用是驱动单纯疱疹病毒(HSV)进入的关键。众所周知,聚阴离子作为抗病毒药物具有巨大的潜力。因此,我们探索了一种基于肽的生物治疗方法,并首次评估了一种由nectin-1衍生的阴离子肽,该阴离子肽旨在结合HSV gD。选择富含酸性和碱性残基的肽,并使用PEP-FOLD3、PROCHECK、ClusPro 2.0和Desmond进行计算建模。采用10 TCID50(组织培养感染剂量50%)病毒剂量,通过杀病毒、细胞预处理、附着抑制、进入抑制和细胞病变效应(CPE)抑制试验来检测其抗病毒效果。在分子动力学(MD)模拟中,C1和C2与HSV-1和HSV-2的gD结合较强。肽C1在250µg/mL浓度下表现出显著的杀病毒活性(HSV-1: 64.92%, HSV-2: 67.16%)、附着抑制(HSV-1: 62.03%, HSV-2: 59.38%)和宿主细胞进入抑制(HSV-1: 71.37%, HSV-2: 76.28%)。CPE抑制实验显示,终浓度为250µg/mL(各125µg/mL)的肽C1和C2联合处理对HSV-1(68.57%)和HSV-2(73.37%)感染具有加性作用。这突出了HSV gd靶向阴离子肽在未来抗HSV治疗中的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Bioinformatics and Biology Insights
Bioinformatics and Biology Insights BIOCHEMICAL RESEARCH METHODS-
CiteScore
6.80
自引率
1.70%
发文量
36
审稿时长
8 weeks
期刊介绍: Bioinformatics and Biology Insights is an open access, peer-reviewed journal that considers articles on bioinformatics methods and their applications which must pertain to biological insights. All papers should be easily amenable to biologists and as such help bridge the gap between theories and applications.
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