Simplistic Software for Analyzing Mass Spectra and a Mixed Experimental-Theoretical Database for Identifying Poisonous and Explosive Substances

IF 4.8 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Denis S. Tikhonov, Mikhail A. Kalinin, Alexander A. Maryewski, Aleksandr A. Avdoshin, Olgert Dallakyan, Nikita A. Vasilev, Egor A. Eliseev, Mandy Koch, Vladimir V. Rybkin, Denis G. Artiukhin
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Abstract

A recent increase in targeted attacks using chemical warfare agents by dictators and authoritarian regimes against politicians, journalists, and other civilians is a major concern. To aid the civil investigators in identifying poisonous substances in such cases, we developed an algorithm and a lightweight and simple-to-use software, ToxicMassSceptic $$ \mathtt{ToxicMassSceptic} $$ , with a database of 400 electron ionization mass spectra entries, which include many poisonous and explosive agents. The identification relies on a window-based reduction of the experimental spectra and four statistical metrics that are combined into a single metametric. The software also features automatic spectral background removal. Furthermore, we provide the workflow for increasing the size of this database by performing theoretical calculations of mass spectra with a molecular dynamics-based approach. The accuracy of both the theoretical prediction workflow and ToxicMassSceptic $$ \mathtt{ToxicMassSceptic} $$ is validated on the experimental spectra. Our results demonstrate that the proposed software package can aid in the preliminary identification of traces of poisonous and explosive substances.

Abstract Image

简单的软件分析质谱和混合实验-理论数据库,用于识别有毒和爆炸性物质
最近独裁者和独裁政权使用化学战剂针对政治家、记者和其他平民的有针对性的攻击有所增加,这是一个主要问题。为了帮助民事调查人员在这种情况下识别有毒物质,我们开发了一种算法和一种轻量级和易于使用的软件,毒物质谱仪$$ \mathtt{ToxicMassSceptic} $$,其中包含400个电子电离质谱条目的数据库,其中包括许多有毒和爆炸性物质。鉴定依赖于基于窗口的实验光谱的缩减和四个统计指标,这四个统计指标被组合成一个单一的超度量。该软件还具有自动光谱背景去除功能。此外,我们还提供了一个工作流程,通过使用基于分子动力学的方法进行质谱的理论计算来增加该数据库的大小。在实验光谱上验证了理论预测流程和ToxicMassSceptic $$ \mathtt{ToxicMassSceptic} $$的准确性。我们的结果表明,所提出的软件包可以帮助初步鉴定痕量的有毒和爆炸性物质。
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来源期刊
CiteScore
6.60
自引率
3.30%
发文量
247
审稿时长
1.7 months
期刊介绍: This distinguished journal publishes articles concerned with all aspects of computational chemistry: analytical, biological, inorganic, organic, physical, and materials. The Journal of Computational Chemistry presents original research, contemporary developments in theory and methodology, and state-of-the-art applications. Computational areas that are featured in the journal include ab initio and semiempirical quantum mechanics, density functional theory, molecular mechanics, molecular dynamics, statistical mechanics, cheminformatics, biomolecular structure prediction, molecular design, and bioinformatics.
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