topoEEG: An Python-framework for analyzing EEG data in neurodegeneratives disease through Topological Deep Learning

IF 2.4 4区 计算机科学 Q2 COMPUTER SCIENCE, SOFTWARE ENGINEERING
Miriam Esteve , Alejandro Martinez-Gracia , Jesus J. Rodríguez-Sala , Antonio Falcó
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引用次数: 0

Abstract

topoEEG is a Python framework designed for advanced EEG analysis, combining the MNE library with Topological Deep Learning (TDL) to enhance insights into neuroimaging, particularly for neurodegenerative diseases such as Alzheimer’s. The framework preprocesses EEG data by removing artifacts using Independent Component Analysis (ICA) and performs Power Spectral Density (PSD) analysis to identify critical frequency bands. By incorporating TDL, topoEEG uncovers topological features that traditional methods often overlook, offering deeper insights into neural activity. Unlike other standalone tools, it provides a unified solution, enhancing the accessibility of sophisticated analytics and supporting research in the diagnosis and understanding of neurodegenerative diseases.
topoEEG:通过拓扑深度学习分析神经退行性疾病脑电图数据的python框架
topoEEG是为高级脑电图分析而设计的Python框架,将MNE库与拓扑深度学习(TDL)相结合,以增强对神经成像的见解,特别是对阿尔茨海默氏症等神经退行性疾病。该框架通过使用独立分量分析(ICA)去除伪影对EEG数据进行预处理,并进行功率谱密度(PSD)分析以识别关键频段。通过结合TDL, topoEEG揭示了传统方法经常忽略的拓扑特征,对神经活动提供了更深入的了解。与其他独立工具不同,它提供了一个统一的解决方案,增强了复杂分析的可访问性,并支持神经退行性疾病的诊断和理解研究。
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来源期刊
SoftwareX
SoftwareX COMPUTER SCIENCE, SOFTWARE ENGINEERING-
CiteScore
5.50
自引率
2.90%
发文量
184
审稿时长
9 weeks
期刊介绍: SoftwareX aims to acknowledge the impact of software on today''s research practice, and on new scientific discoveries in almost all research domains. SoftwareX also aims to stress the importance of the software developers who are, in part, responsible for this impact. To this end, SoftwareX aims to support publication of research software in such a way that: The software is given a stamp of scientific relevance, and provided with a peer-reviewed recognition of scientific impact; The software developers are given the credits they deserve; The software is citable, allowing traditional metrics of scientific excellence to apply; The academic career paths of software developers are supported rather than hindered; The software is publicly available for inspection, validation, and re-use. Above all, SoftwareX aims to inform researchers about software applications, tools and libraries with a (proven) potential to impact the process of scientific discovery in various domains. The journal is multidisciplinary and accepts submissions from within and across subject domains such as those represented within the broad thematic areas below: Mathematical and Physical Sciences; Environmental Sciences; Medical and Biological Sciences; Humanities, Arts and Social Sciences. Originating from these broad thematic areas, the journal also welcomes submissions of software that works in cross cutting thematic areas, such as citizen science, cybersecurity, digital economy, energy, global resource stewardship, health and wellbeing, etcetera. SoftwareX specifically aims to accept submissions representing domain-independent software that may impact more than one research domain.
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