Cyan Thermal Proteins Derived From Thermal Green Protein.

IF 2.8 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Acacia Jurkowski, Dhruv Sitapara, Austin Brown, Samantha Ball, Trey Norman, Anastasia Jones, Jessica Gilbert, Taryn Criblez, Andrew Yates, Shiv Bansal, Natasha M DeVore
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Abstract

Thermal green protein (TGP) is a consensus derived green fluorescent protein designed with extreme thermostability, high pH and chemical stability, as well as high quantum yield for use in more severe conditions. Our goal is to design a cyan version of TGP that maintains these characteristics. We were able to shift the fluorescence wavelength of TGP from green to cyan creating CTP 0.0 by incorporating a single chromophore mutation, Y67W, but this mutation also decreased the quantum yield to 0.056. Further mutations were incorporated to increase the quantum yield through incorporating hydrogen bonding interactions to the chromophore and to remove a kink present in beta strand seven. These proteins, CTP 0.5 (Y67W I199T) and CTP 1.0 (Y67W I199T W143L E144I P145D S146A), increased the quantum yield to 0.07 and 0.37, respectively and improved stability characteristics. CTP 0.75 incorporated another chromophore mutation into CTP 1.0 (Q66E) to increase the stability characteristics but decreased the quantum yield to 0.22. The CTP 1.0 cyan protein was also compared to mTurquoise2, one of the current best cyan fluorescent proteins based on GFP. CTP 1.0 had comparable chemical stability and improved acid stability. Crystal structures were solved for CTP 0.5 at pH 6.5 (2.00 Å), CTP 1.0 at pH 6.5 (1.70 Å), CTP 1.0 at pH 8.5 (1.60 Å), and CTP 0.75 at pH 7.4 (1.70 Å). Structural analysis of the proteins showed that while improvement to beta strand seven was unsuccessful, the increase in quantum yield is likely due to the incorporation of the T199 residue and subsequent hydrogen bonding interaction improvements with the chromophore.

由热绿蛋白衍生的青色热蛋白。
热绿蛋白(TGP)是一种共识衍生的绿色荧光蛋白,具有极高的热稳定性,高pH值和化学稳定性,以及高量子产率,可用于更恶劣的条件。我们的目标是设计一个保持这些特征的TGP的青色版本。通过加入单个发色团突变Y67W,我们能够将TGP的荧光波长从绿色转移到青色,产生CTP 0.0,但该突变也将量子产率降低到0.056。进一步的突变通过将氢键相互作用与发色团结合来增加量子产率,并去除β -链7中的扭结。这些蛋白CTP 0.5 (Y67W I199T)和CTP 1.0 (Y67W I199T W143L E144I P145D S146A)分别将量子产率提高到0.07和0.37,并改善了稳定性特性。CTP 0.75在CTP 1.0 (Q66E)中加入了另一个发色团突变,增加了稳定性特性,但将量子产率降低到0.22。并将CTP 1.0青色蛋白与目前基于GFP的最佳青色荧光蛋白之一mTurquoise2进行了比较。CTP 1.0具有相当的化学稳定性和改进的酸稳定性。CTP 0.5在pH 6.5 (2.00 Å)、CTP 1.0在pH 6.5 (1.70 Å)、CTP 1.0在pH 8.5 (1.60 Å)和CTP 0.75在pH 7.4 (1.70 Å)下的晶体结构求解。蛋白质的结构分析表明,虽然对- 7链的改进没有成功,但量子产率的增加可能是由于T199残基的加入以及随后与发色团的氢键相互作用的改善。
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来源期刊
Proteins-Structure Function and Bioinformatics
Proteins-Structure Function and Bioinformatics 生物-生化与分子生物学
CiteScore
5.90
自引率
3.40%
发文量
172
审稿时长
3 months
期刊介绍: PROTEINS : Structure, Function, and Bioinformatics publishes original reports of significant experimental and analytic research in all areas of protein research: structure, function, computation, genetics, and design. The journal encourages reports that present new experimental or computational approaches for interpreting and understanding data from biophysical chemistry, structural studies of proteins and macromolecular assemblies, alterations of protein structure and function engineered through techniques of molecular biology and genetics, functional analyses under physiologic conditions, as well as the interactions of proteins with receptors, nucleic acids, or other specific ligands or substrates. Research in protein and peptide biochemistry directed toward synthesizing or characterizing molecules that simulate aspects of the activity of proteins, or that act as inhibitors of protein function, is also within the scope of PROTEINS. In addition to full-length reports, short communications (usually not more than 4 printed pages) and prediction reports are welcome. Reviews are typically by invitation; authors are encouraged to submit proposed topics for consideration.
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