Pyroptosis-Related Gene Signatures Enable Robustly Diagnosis, Prognosis and Immune Responses Prediction in Uterine Corpus Endometrial Carcinoma.

IF 3.3 3区 医学 Q2 ONCOLOGY
Journal of Cancer Pub Date : 2025-05-08 eCollection Date: 2025-01-01 DOI:10.7150/jca.104826
Xuanming Chen, Xiangyu Jin, Jiafu Wang, Hanfei Li, Chuanfang Wu, Jinku Bao
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引用次数: 0

Abstract

Purpose: Uterine corpus endometrial carcinoma (UCEC) is a gynecological malignancy with poor prognosis and high lethality rates. Pyroptosis, a pro-inflammatory programmed cell death pattern, significantly influences tumor growth, development, and metastasis. We intend to explore whether pyroptosis-related genes can be screened as targets for early detection and patient prognosis. Methods: We used nine common machine learning algorithms to build classifiers based on the pyroptosis-related genes, evaluated the classifiers' performance using metrics like the receiver operating characteristic curve (ROC), and verified the results using external datasets. Using Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis, we built a predictive model. ROC and univariate/multivariate Cox analyses were used to assess the model's performance and its independence in predicting patient prognosis. We used a variety of statistical methods and algorithms to investigate the connection between tumor immunity and pyroptosis-related genes. Results: We identified 26 pyroptosis-related genes associated with the diagnosis and prognosis of UCEC. We found the logistic regression classifier performing the best. We then constructed a predictive model based on seven PRGs about IRF2, TIRAP, BAK1, GSDMD, CHMP2A, GPX4, CHMP2B. The pyroptosis-related gene risk signature (PRGRS) effectively classified UCEC patients. We demonstrated that PRGRS independently impacted UCEC prognosis and confirmed its expression using qRT-PCR experiments. Furthermore, we found associations between PRGRS and tumor immune response. Conclusion: Our study highlights novel pyroptosis-related gene signatures that may be utilized for early screening and prognosis prediction in UCEC patients, offering potential targets for future research and guidance for personalized anticancer therapies.

子宫内膜癌中与热相关的基因特征可用于诊断、预后和免疫反应预测。
目的:子宫体子宫内膜癌(UCEC)是一种预后差、死亡率高的妇科恶性肿瘤。焦亡是一种促炎程序性细胞死亡模式,显著影响肿瘤的生长、发展和转移。我们打算探索是否可以筛选焦热相关基因作为早期发现和患者预后的靶点。方法:采用9种常用的机器学习算法构建基于热解相关基因的分类器,使用受试者工作特征曲线(ROC)等指标评估分类器的性能,并使用外部数据集验证结果。采用最小绝对收缩和选择算子(LASSO)回归分析,建立了预测模型。采用ROC和单因素/多因素Cox分析来评估模型的性能及其预测患者预后的独立性。我们使用多种统计方法和算法来研究肿瘤免疫与热噬相关基因之间的联系。结果:我们鉴定出26个与UCEC的诊断和预后相关的焦热相关基因。我们发现逻辑回归分类器表现最好。然后,我们基于IRF2、TIRAP、BAK1、GSDMD、CHMP2A、GPX4、CHMP2B等7个PRGs构建了预测模型。热释相关基因风险标记(PRGRS)可以有效地对UCEC患者进行分类。我们证明PRGRS独立影响UCEC预后,并通过qRT-PCR实验证实其表达。此外,我们还发现了PRGRS与肿瘤免疫应答之间的关联。结论:本研究为UCEC患者的早期筛查和预后预测提供了新的热解相关基因特征,为未来的研究和个性化抗癌治疗提供了潜在的靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Cancer
Journal of Cancer ONCOLOGY-
CiteScore
8.10
自引率
2.60%
发文量
333
审稿时长
12 weeks
期刊介绍: Journal of Cancer is an open access, peer-reviewed journal with broad scope covering all areas of cancer research, especially novel concepts, new methods, new regimens, new therapeutic agents, and alternative approaches for early detection and intervention of cancer. The Journal is supported by an international editorial board consisting of a distinguished team of cancer researchers. Journal of Cancer aims at rapid publication of high quality results in cancer research while maintaining rigorous peer-review process.
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