Cytochrome P450BM-3 and P450 11A1 retain Compound I (FeO3+) chemistry with electrophilic substrates poised for Compound 0 (Fe3+O2¯) reactions

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Kevin D. McCarty, Yasuhiro Tateishi, F. Peter Guengerich
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Abstract

The catalytic cycle of cytochrome P450 (P450) enzymes involves ferric peroxide anion (Fe3+O2¯, Compound 0) and perferryl oxygen (FeO3+, Compound I) intermediates. Compound I is generally viewed as responsible for most P450-catalyzed oxidations, but Compound 0 has been implicated in the oxidation of some carbonyl compounds, particularly deformylation reactions. We considered the hypothesis that Compound 0 could also attack other electrophilic carbon atoms and accordingly positioned keto groups at preferred hydroxylation sites of substrates for two P450s with well-defined catalytic reactions, bacterial P450BM-3 (102A1) and human P450 11A1. The predicted products of Compound I and Compound 0 reactions were analyzed. With the normally preferred ω-1 site blocked, P450BM-3 oxidized 12-oxotridecanoic acid (12-oxo C13:0) only at the ω-2 position (yielding 11-hydroxy,12-oxotridecanoic acid), indicative of a Compound I oxidation. P450 11A1 is highly selective for catalyzing the 22R-hydroxylation of cholesterol (and some other sterols) in the first step of its overall side-chain cleavage reaction. With 22-oxocholesterol as the substrate, P450 11A1 (slowly) generated only 23-hydroxy,22-oxocholesterol, indicative of Compound I oxidation. Neither P450 generated the products expected from nucleophilic Compound 0 reactions. We conclude that the strategic placement of electrophilic oxo substituents at sites of substrate hydroxylation failed to divert the oxidation mechanism to a Compound 0 pathway with either enzyme. Instead, the Compound I mechanism – blocked at the preferred reaction site – was redirected to neighboring carbons, suggesting that the basis for Compound 0-mediated reactions lies in chemical properties of the enzyme rather than those of the substrate.
细胞色素P450BM-3和P450 11A1保留了化合物I (FeO3+)与亲电底物的化学反应,准备进行化合物0 (Fe3+O2¯)的反应
细胞色素P450 (P450)酶的催化循环涉及过氧化铁阴离子(Fe3+O2¯,化合物0)和过铁氧基氧(FeO3+,化合物I)中间体。化合物I通常被认为是大多数p450催化氧化的原因,但化合物0与一些羰基化合物的氧化有关,特别是去甲酰基化反应。我们考虑了化合物0也可以攻击其他亲电碳原子的假设,并相应地将酮基定位于具有明确催化反应的两种P450(细菌P450BM-3 (102A1)和人类p45011a1)的底物羟基化位点。对化合物1和化合物0反应的预测产物进行了分析。由于通常首选的ω-1位点被阻断,P450BM-3仅在ω-2位置氧化12-氧三烷酸(12-氧C13:0)(生成11-羟基,12-氧三烷酸),表明化合物I氧化。P450 11A1在其整个侧链裂解反应的第一步催化胆固醇(和其他一些固醇)的22r -羟基化具有高度选择性。以22- oxo胆固醇为底物,P450 11A1(缓慢)仅生成23-羟基22- oxo胆固醇,表明化合物I氧化。两种P450都没有产生亲核化合物0反应所期望的产物。我们得出结论,亲电氧取代基在底物羟基化位点的战略性放置未能将氧化机制转移到化合物0途径。相反,化合物I的机制——在首选反应位点被阻断——被重定向到邻近的碳上,这表明化合物0介导的反应的基础在于酶的化学性质,而不是底物的化学性质。
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来源期刊
Journal of Biological Chemistry
Journal of Biological Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
4.20%
发文量
1233
期刊介绍: The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.
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