{"title":"Fractal dimensionality of a coiled helical coil.","authors":"Subhash Kak","doi":"10.1142/S0219720025710015","DOIUrl":null,"url":null,"abstract":"<p><p>The helical coil is ubiquitous in biological and natural systems, and it is often the basic form in complex structures. This paper considers the question of its dimensionality, <i>D</i>, in biological information as the helical coil goes through recursive coiling as in DNA and RNA molecules in chromatin, in which the <i>D</i>-value is a function of the lengthening of the curve. It is shown that the dimensionality of coiled coils is virtually equal to <i>e</i>. Of the three forms of DNA, the dimensionality of the B-form is nearest to the optimal value, and this might be the reason why it is most common.</p>","PeriodicalId":48910,"journal":{"name":"Journal of Bioinformatics and Computational Biology","volume":" ","pages":"2571001"},"PeriodicalIF":0.9000,"publicationDate":"2025-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Bioinformatics and Computational Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1142/S0219720025710015","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MATHEMATICAL & COMPUTATIONAL BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
The helical coil is ubiquitous in biological and natural systems, and it is often the basic form in complex structures. This paper considers the question of its dimensionality, D, in biological information as the helical coil goes through recursive coiling as in DNA and RNA molecules in chromatin, in which the D-value is a function of the lengthening of the curve. It is shown that the dimensionality of coiled coils is virtually equal to e. Of the three forms of DNA, the dimensionality of the B-form is nearest to the optimal value, and this might be the reason why it is most common.
期刊介绍:
The Journal of Bioinformatics and Computational Biology aims to publish high quality, original research articles, expository tutorial papers and review papers as well as short, critical comments on technical issues associated with the analysis of cellular information.
The research papers will be technical presentations of new assertions, discoveries and tools, intended for a narrower specialist community. The tutorials, reviews and critical commentary will be targeted at a broader readership of biologists who are interested in using computers but are not knowledgeable about scientific computing, and equally, computer scientists who have an interest in biology but are not familiar with current thrusts nor the language of biology. Such carefully chosen tutorials and articles should greatly accelerate the rate of entry of these new creative scientists into the field.