Solvation Free Energies of Ion Dissociations in Dichloromethane: En Route to Accurate Computations.

IF 2.8 2区 化学 Q3 CHEMISTRY, PHYSICAL
Adélaïde Savoy, Eno Paenurk, Robert Pollice, Philippe H Hünenberger, Peter Chen
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引用次数: 0

Abstract

Calculating accurate free energies for solution-phase reactions is notoriously difficult. In our previous joint experimental and computational studies, we observed a striking failure of quantum mechanical calculations with popular implicit solvent models to even qualitatively reproduce the experimental trends of dissociation free energies of numerous proton-bound pyridine dimers in organic solvents [Pollice, R. . J. Am. Chem. Soc. 2017, 139(37), 13126-13140]; [Pollice, R. . Angew. Chem., Int. Ed. 2019, 58(40), 14281-14288]. In this article, we expand the computational study of the dissociation of proton-bound pyridine dimers in the gas phase and in dichloromethane (DCM). In an effort to determine the prerequisites for reproducing the experimental trends and magnitudes of the dissociation free energies (ΔGdiss) in solvent, we investigated the impact of accounting for the ensemble free energy, umbrella sampling, thermodynamic integration, and explicit solvation using semiempirical quantum mechanics and molecular mechanics. We estimated the effect of conformational free energy contributions with semiempirical quantum mechanics (SE). Molecular dynamics (MD) with explicit solvation and classical molecular mechanics (MM) was used as a method to treat not only the solute but also the solvent configurational entropy. We found that explicit solvation with MM is indeed capable of reproducing ΔGdiss in DCM for our test system within an acceptable error margin. We analyze and discuss the results and limitations of our approach for calculating the solvation free energy.

二氯甲烷中离子解离的溶剂化自由能:在精确计算的道路上。
众所周知,精确计算溶液相反应的自由能是非常困难的。在我们之前的联合实验和计算研究中,我们观察到使用流行的隐式溶剂模型进行量子力学计算的显著失败,甚至无法定性地再现有机溶剂中许多质子结合吡啶二聚体的解离自由能的实验趋势[Pollice, R.]。j。化学。Soc. 2017, 139(37), 13126-13140];[警察,R.]Angew。化学。, Int。编辑,2019,58(40),14281-14288。本文扩展了质子结合吡啶二聚体在气相和二氯甲烷(DCM)中解离的计算研究。为了确定重现溶剂中解离自由能(ΔGdiss)的实验趋势和大小的先决条件,我们研究了使用半经验量子力学和分子力学计算系综自由能、伞式采样、热力学积分和显式溶剂化的影响。我们用半经验量子力学估计了构象自由能贡献的影响。采用显式溶剂化分子动力学(MD)和经典分子力学(MM)作为处理溶质和溶剂构型熵的方法。我们发现,用MM显式溶剂化确实能够在我们的测试系统中在可接受的误差范围内再现DCM中的ΔGdiss。我们分析和讨论了我们计算溶剂化自由能的方法的结果和局限性。
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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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