Uncertainty estimation for trust attribution to speed-of-sound reconstruction with variational networks.

IF 2.3 3区 医学 Q3 ENGINEERING, BIOMEDICAL
Sonia Laguna, Lin Zhang, Can Deniz Bezek, Monika Farkas, Dieter Schweizer, Rahel A Kubik-Huch, Orcun Goksel
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引用次数: 0

Abstract

Purpose: Speed-of-sound (SoS) is a biomechanical characteristic of tissue, and its imaging can provide a promising biomarker for diagnosis. Reconstructing SoS images from ultrasound acquisitions can be cast as a limited-angle computed-tomography problem, with variational networks being a promising model-based deep learning solution. Some acquired data frames may, however, get corrupted by noise due to, e.g., motion, lack of contact, and acoustic shadows, which in turn negatively affects the resulting SoS reconstructions.

Methods: We propose to use the uncertainty in SoS reconstructions to attribute trust to each individual acquired frame. Given multiple acquisitions, we then use an uncertainty-based automatic selection among these retrospectively, to improve diagnostic decisions. We investigate uncertainty estimation based on Monte Carlo Dropout and Bayesian Variational Inference.

Results: We assess our automatic frame selection method for differential diagnosis of breast cancer, distinguishing between benign fibroadenoma and malignant carcinoma. We evaluate 21 lesions classified as BI-RADS 4, which represents suspicious cases for probable malignancy. The most trustworthy frame among four acquisitions of each lesion was identified using uncertainty-based criteria. Selecting a frame informed by uncertainty achieved an area under curve of 76% and 80% for Monte Carlo Dropout and Bayesian Variational Inference, respectively, superior to any uncertainty-uninformed baselines with the best one achieving 64%.

Conclusion: A novel use of uncertainty estimation is proposed for selecting one of multiple data acquisitions for further processing and decision making.

变分网络声速重建信任归属的不确定性估计。
目的:声速(SoS)是组织的生物力学特征,其成像可以为诊断提供有前途的生物标志物。从超声采集中重建SoS图像可以看作是一个有限角度的计算机断层扫描问题,变分网络是一个很有前途的基于模型的深度学习解决方案。然而,由于运动、缺乏接触和声阴影等原因,一些采集到的数据帧可能会被噪声破坏,这反过来又会对所得到的SoS重建产生负面影响。方法:我们提出利用SoS重构中的不确定性将信任归属于每个个体获得的框架。给定多个收购,我们然后使用不确定性为基础的自动选择这些回顾性,以提高诊断决策。研究了基于蒙特卡罗Dropout和贝叶斯变分推理的不确定性估计。结果:我们评估了我们的自动框架选择方法鉴别诊断乳腺癌,区分良性纤维腺瘤和恶性癌。我们评估了21个被分类为BI-RADS 4的病变,这代表了可能的恶性肿瘤的可疑病例。使用基于不确定性的标准确定每个病变的四个获取中最值得信赖的框架。选择一个不确定性知情的框架,蒙特卡罗Dropout和贝叶斯变分推断的曲线下面积分别达到76%和80%,优于任何不确定性不知情的基线,最佳基线达到64%。结论:提出了一种新的不确定性估计方法,用于从多个数据采集中选择一个进行进一步处理和决策。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
International Journal of Computer Assisted Radiology and Surgery
International Journal of Computer Assisted Radiology and Surgery ENGINEERING, BIOMEDICAL-RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
CiteScore
5.90
自引率
6.70%
发文量
243
审稿时长
6-12 weeks
期刊介绍: The International Journal for Computer Assisted Radiology and Surgery (IJCARS) is a peer-reviewed journal that provides a platform for closing the gap between medical and technical disciplines, and encourages interdisciplinary research and development activities in an international environment.
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