Deep-learning-based Partial Volume Correction in 99mTc-TRODAT-1 SPECT for Parkinson's Disease: A Preliminary Study on Clinical Translation.

IF 6.8 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS
Haiyan Wang, Bingjie Wang, Wenbo Huang, Yibin Liu, Yu Du, Guang-Uei Hung, Zhanli Hu, Greta S P Mok
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引用次数: 0

Abstract

99mTc-TRODAT-1 SPECT is effective for the early detection of Parkinson's disease (PD). However, SPECT images suffer from severe partial volume effect, which impairs tissue boundary clarity and subsequent quantification accuracy. This work proposes an anatomical prior- and segmentation-free deep learning (DL)-based partial volume correction (PVC) method using an attentionbased conditional generative adversarial network (Att-cGAN) for 99mTc-TRODAT-1 SPECT. A population of 454 digital brain phantoms modelling anatomical and 99mTc-TRODAT activity variations in different PD categories are used to generate realistic SPECT projections using the SIMIND Monte Carlo code, and then reconstructed using ordered subset expectation maximization algorithm. The dataset is split into 320, 44 and 90 used for training, validation, and testing. Att-cGAN, cGAN and U-Net are implemented based on simulated data, then directly tested on 100 retrospectively collected clinical 99mTc-TRODAT data, with same acquisition and reconstruction parameters as in simulations. Non-DL PVC methods of Van-Cittert and iterative Yang are implemented for comparison. Physical and clinical metrics, as well as a no-gold standard technique (NGST) are applied to evaluate different PVC methods in the absence of clinical ground truth. Att-cGAN yields superior PVC performance in simulations as compared to other methods in physical and clinical evaluations. NGST assessment is generally consistent with the clinical metric evaluation. For the clinical study, Att-cGAN also obtains better NGST result than others striatal compartments can be discriminated on DLbased processed images. DL-PVC method is feasible for clinical PD SPECT using highly realistic simulated data.

基于深度学习的帕金森病99mTc-TRODAT-1 SPECT部分体积校正:临床翻译的初步研究
99mTc-TRODAT-1 SPECT对帕金森病(PD)的早期检测是有效的。然而,SPECT图像遭受严重的部分体积效应,这损害了组织边界的清晰度和随后的定量准确性。这项工作提出了一种基于解剖先验和无分割深度学习(DL)的部分体积校正(PVC)方法,该方法使用基于注意力的条件生成对抗网络(at - cgan)用于99mTc-TRODAT-1 SPECT。利用SIMIND蒙特卡罗代码生成了454个模拟不同PD类别解剖和99mTc-TRODAT活动变化的数字脑幻影,然后使用有序子集期望最大化算法重建了真实的SPECT投影。数据集分为320、44和90,用于训练、验证和测试。Att-cGAN、cGAN和U-Net是基于模拟数据实现的,然后直接在100个回顾性收集的临床99mTc-TRODAT数据上进行测试,采集和重建参数与模拟中相同。实现了Van-Cittert和迭代Yang的非dl PVC方法进行比较。物理和临床指标,以及无金标准技术(NGST)应用于评估不同的PVC方法在缺乏临床基础真相。与物理和临床评估中的其他方法相比,at - cgan在模拟中产生优越的PVC性能。NGST评价与临床指标评价基本一致。在临床研究中,at - cgan在基于dl的处理图像上也能获得比其他纹状体室更好的NGST结果。DL-PVC方法对临床PD SPECT具有高度逼真的模拟数据,是可行的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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