{"title":"GLAPAL-H: Global, Local, And Parts Aware Learner for Hydrocephalus Infection Diagnosis in Low-Field MRI.","authors":"Srijit Mukherjee, Kelsey Templeton, Starlin Tindimwebwa, Ivy Lin, Jason Sutin, Mingzhao Yu, Mallory Peterson, Chip Truwit, Steven J Schiff, Vishal Monga","doi":"10.1109/TBME.2025.3578541","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>The study aims to develop a method for differentiating between healthy, post-infectious hydrocephalus (PIH), and non-post-infectious hydrocephalus (NPIH) in infants using low-field MRI, which is a safer, low-cost alternative to CT scans. The study develops a custom approach that captures hydrocephalic etiology while simultaneously addressing quality issues encountered in low-field MRI.</p><p><strong>Methods: </strong>Specifically, we propose GLAPAL-H, a Global, Local, And Parts Aware Learner, which develops a multi-task architecture with global, local, and parts segmentation branches. The architecture segments images into brain tissue and CSF while using a shallow CNN for local feature extraction and develops a parallel deep CNN branch for global feature extraction. Three regularized training loss functions are developed - one for each of global, local, and parts components. The global regularizer captures holistic features, the local focuses on fine details, and the parts regularizer learns soft segmentation masks that enable local features to capture hydrocephalic etiology.</p><p><strong>Results: </strong>The study's results show that GLAPAL-H outperforms state-of-the-art alternatives, including CT-based approaches, for both Two-Class (PIH vs. NPIH) and Three-Class (PIH vs. NPIH vs. Healthy) classification tasks in accuracy, interpretability, and generalizability.</p><p><strong>Conclusion/significance: </strong>GLAPAL-H highlights the potential of low-field MRI as a safer, low-cost alternative to CT imaging for pediatric hydrocephalus infection diagnosis and management. Practically, GLAPAL-H demonstrates robustness against quantity and quality of training imagery, enhancing its deployability.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.4000,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Biomedical Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1109/TBME.2025.3578541","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Objective: The study aims to develop a method for differentiating between healthy, post-infectious hydrocephalus (PIH), and non-post-infectious hydrocephalus (NPIH) in infants using low-field MRI, which is a safer, low-cost alternative to CT scans. The study develops a custom approach that captures hydrocephalic etiology while simultaneously addressing quality issues encountered in low-field MRI.
Methods: Specifically, we propose GLAPAL-H, a Global, Local, And Parts Aware Learner, which develops a multi-task architecture with global, local, and parts segmentation branches. The architecture segments images into brain tissue and CSF while using a shallow CNN for local feature extraction and develops a parallel deep CNN branch for global feature extraction. Three regularized training loss functions are developed - one for each of global, local, and parts components. The global regularizer captures holistic features, the local focuses on fine details, and the parts regularizer learns soft segmentation masks that enable local features to capture hydrocephalic etiology.
Results: The study's results show that GLAPAL-H outperforms state-of-the-art alternatives, including CT-based approaches, for both Two-Class (PIH vs. NPIH) and Three-Class (PIH vs. NPIH vs. Healthy) classification tasks in accuracy, interpretability, and generalizability.
Conclusion/significance: GLAPAL-H highlights the potential of low-field MRI as a safer, low-cost alternative to CT imaging for pediatric hydrocephalus infection diagnosis and management. Practically, GLAPAL-H demonstrates robustness against quantity and quality of training imagery, enhancing its deployability.
目的:本研究旨在开发一种使用低场MRI区分婴儿健康、感染后脑积水(PIH)和非感染后脑积水(NPIH)的方法,这是一种比CT扫描更安全、成本更低的替代方法。该研究开发了一种定制方法,可以捕获脑积水的病因,同时解决低场MRI遇到的质量问题。方法:具体来说,我们提出了GLAPAL-H,一个全局、局部和部件感知学习器,它开发了一个具有全局、局部和部件分割分支的多任务架构。该架构将图像分割为脑组织和脑脊液,同时使用浅CNN进行局部特征提取,并开发并行深CNN分支进行全局特征提取。提出了三个正则化的训练损失函数,分别对应全局、局部和局部分量。全局正则化器捕获整体特征,局部正则化器关注细节,局部正则化器学习软分割掩码,使局部特征能够捕获脑积水的病因。结果:研究结果表明,GLAPAL-H在准确率、可解释性和概括性方面优于最先进的替代方法,包括基于ct的方法,无论是两类(PIH vs. NPIH)还是三类(PIH vs. NPIH vs.健康)分类任务。结论/意义:GLAPAL-H强调了低场MRI作为儿童脑积水感染诊断和治疗的一种更安全、低成本的替代CT成像的潜力。实际上,GLAPAL-H对训练图像的数量和质量表现出鲁棒性,增强了其可部署性。
期刊介绍:
IEEE Transactions on Biomedical Engineering contains basic and applied papers dealing with biomedical engineering. Papers range from engineering development in methods and techniques with biomedical applications to experimental and clinical investigations with engineering contributions.