{"title":"Automatic detection of fungiform papillae on the human tongue via Convolutional Neural Networks and identification of the best performing model.","authors":"Lala Chaimae Naciri, Raffaella Fiamma Cabini, Melania Melis, Roberto Crnjar, Diego Ulisse Pizzagalli, Iole Tomassini Barbarossa","doi":"10.1016/j.csbj.2025.05.014","DOIUrl":null,"url":null,"abstract":"<p><p>Fungiform papillae (FPs) are fundamental for taste perception, as they contain the taste sensory cells responsible for detecting taste stimuli. Variations in the number and functionality of FPs among individuals lead to differences in taste perception, impacting the ability to identify nutrient-rich foods, health, and the joy of consuming tasty foods. Detecting FPs is a complex and time-consuming task, and there is no consensus on manual and automated methods for their identification and analysis.</p><p><strong>Objectives: </strong>This work aimed to provide an efficient, reliable, and automatic method for FP identification on the tongue, considering the physiological variations in morphology and distribution among subjects.</p><p><strong>Methods: </strong>We used three different Convolutional Neural Networks as a regression task on 175 images of the tongue, the Classic U-Net, the MultiResUNet, and the Optimized U-Net, designed to enhance the performance also when it must identify FPs in challenging input images.</p><p><strong>Results: </strong>The Optimized U-Net showed the best performance by achieving the lowest errors and the highest similarity between Ground Truths and prediction values, and the more balanced detection of True Positives, Untrue Negatives, and Untrue Positives.</p><p><strong>Conclusions: </strong>Our results show that the Optimized U-Net achieved the highest stability, accuracy, and robustness in learning and prediction of FPs with challenging morphologies. The ability to automatically detect FPs has important implications for understanding individual differences in taste perception, which could eventually help in diagnosing taste disorders or guiding personalized nutrition plans.</p>","PeriodicalId":10715,"journal":{"name":"Computational and structural biotechnology journal","volume":"27 ","pages":"1927-1934"},"PeriodicalIF":4.4000,"publicationDate":"2025-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12145518/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational and structural biotechnology journal","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.csbj.2025.05.014","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Fungiform papillae (FPs) are fundamental for taste perception, as they contain the taste sensory cells responsible for detecting taste stimuli. Variations in the number and functionality of FPs among individuals lead to differences in taste perception, impacting the ability to identify nutrient-rich foods, health, and the joy of consuming tasty foods. Detecting FPs is a complex and time-consuming task, and there is no consensus on manual and automated methods for their identification and analysis.
Objectives: This work aimed to provide an efficient, reliable, and automatic method for FP identification on the tongue, considering the physiological variations in morphology and distribution among subjects.
Methods: We used three different Convolutional Neural Networks as a regression task on 175 images of the tongue, the Classic U-Net, the MultiResUNet, and the Optimized U-Net, designed to enhance the performance also when it must identify FPs in challenging input images.
Results: The Optimized U-Net showed the best performance by achieving the lowest errors and the highest similarity between Ground Truths and prediction values, and the more balanced detection of True Positives, Untrue Negatives, and Untrue Positives.
Conclusions: Our results show that the Optimized U-Net achieved the highest stability, accuracy, and robustness in learning and prediction of FPs with challenging morphologies. The ability to automatically detect FPs has important implications for understanding individual differences in taste perception, which could eventually help in diagnosing taste disorders or guiding personalized nutrition plans.
期刊介绍:
Computational and Structural Biotechnology Journal (CSBJ) is an online gold open access journal publishing research articles and reviews after full peer review. All articles are published, without barriers to access, immediately upon acceptance. The journal places a strong emphasis on functional and mechanistic understanding of how molecular components in a biological process work together through the application of computational methods. Structural data may provide such insights, but they are not a pre-requisite for publication in the journal. Specific areas of interest include, but are not limited to:
Structure and function of proteins, nucleic acids and other macromolecules
Structure and function of multi-component complexes
Protein folding, processing and degradation
Enzymology
Computational and structural studies of plant systems
Microbial Informatics
Genomics
Proteomics
Metabolomics
Algorithms and Hypothesis in Bioinformatics
Mathematical and Theoretical Biology
Computational Chemistry and Drug Discovery
Microscopy and Molecular Imaging
Nanotechnology
Systems and Synthetic Biology