The K+/Y3+ cationic exchange in a C5-symmetric metallamacrocyclic scaffold: DFT examination with QTAIM, ELF, MEP approaches and XRD study of the final alaninehydroximate complex.
{"title":"The K<sup>+</sup>/Y<sup>3+</sup> cationic exchange in a C<sub>5</sub>-symmetric metallamacrocyclic scaffold: DFT examination with QTAIM, ELF, MEP approaches and XRD study of the final alaninehydroximate complex.","authors":"Grigory Zhigulin, Galina Zabrodina, Evgeny Baranov, Marina Katkova, Sergey Ketkov","doi":"10.1007/s00894-025-06409-5","DOIUrl":null,"url":null,"abstract":"<p><strong>Context: </strong>Participation of the heterobimetallic potassium-copper metallamacrocycle in synthesis of the yttrium-copper C<sub>5</sub>-symmetric complex based on the L-α-alaninehydroximate (Alaha) ligands was investigated by DFT. Two possible conformations of the K(I)-Cu(II) intermediate which can realize in solution were simulated. Theoretical estimations of an activation barrier for the conformational conversion, ∆G<sup>≠</sup><sub>sol</sub>(298.15) = 2.7 and 1.0 kcal/mol, indicate a structural inversion of the encapsulated K<sup>+</sup> ion relative to the copper-containing metallamacrocyclic environment (scaffold). The K(I)-Cu(II) intermediate is considered as a handy molecular platform for facile chelation of the Y<sup>3+</sup> ions in water solutions that can be used in the nuclear medicine. Replacement of the K<sup>+</sup> central ion by Y<sup>3+</sup> is driven by the higher positive charge of the latter which makes it a stronger acceptor of the metallamacrocyclic electron density. Corresponding changes in the electron structure were revealed and quantified by the DFT calculations. Also, the theoretical thermodynamic estimations predict enhanced stability of the final Y(III)-Cu(II) metallamacrocycle. Accordingly, the water-soluble Y(III)-Cu(II) alaninehydroximate complex was prepared in the presence of K<sub>2</sub>CO<sub>3</sub> as one of starting reagents.</p><p><strong>Methods: </strong>The quantum chemical calculations were performed at the M06/def2-TZVP and TPSS-D3/def2-TZVP levels of DFT with use of the polarizable continuum model. The differences in the electron structures were investigated in detail by the quantum theory of atoms in molecules, electron localization function, and molecular electrostatic potential. The final product of the Y(CO<sub>3</sub>)(H<sub>2</sub>O)[15-MC<sub>Cu(II)Alaha</sub>-5](I)∙11H<sub>2</sub>O composition was characterized by the X-ray diffraction.</p>","PeriodicalId":651,"journal":{"name":"Journal of Molecular Modeling","volume":"31 7","pages":"180"},"PeriodicalIF":2.5000,"publicationDate":"2025-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Modeling","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1007/s00894-025-06409-5","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Context: Participation of the heterobimetallic potassium-copper metallamacrocycle in synthesis of the yttrium-copper C5-symmetric complex based on the L-α-alaninehydroximate (Alaha) ligands was investigated by DFT. Two possible conformations of the K(I)-Cu(II) intermediate which can realize in solution were simulated. Theoretical estimations of an activation barrier for the conformational conversion, ∆G≠sol(298.15) = 2.7 and 1.0 kcal/mol, indicate a structural inversion of the encapsulated K+ ion relative to the copper-containing metallamacrocyclic environment (scaffold). The K(I)-Cu(II) intermediate is considered as a handy molecular platform for facile chelation of the Y3+ ions in water solutions that can be used in the nuclear medicine. Replacement of the K+ central ion by Y3+ is driven by the higher positive charge of the latter which makes it a stronger acceptor of the metallamacrocyclic electron density. Corresponding changes in the electron structure were revealed and quantified by the DFT calculations. Also, the theoretical thermodynamic estimations predict enhanced stability of the final Y(III)-Cu(II) metallamacrocycle. Accordingly, the water-soluble Y(III)-Cu(II) alaninehydroximate complex was prepared in the presence of K2CO3 as one of starting reagents.
Methods: The quantum chemical calculations were performed at the M06/def2-TZVP and TPSS-D3/def2-TZVP levels of DFT with use of the polarizable continuum model. The differences in the electron structures were investigated in detail by the quantum theory of atoms in molecules, electron localization function, and molecular electrostatic potential. The final product of the Y(CO3)(H2O)[15-MCCu(II)Alaha-5](I)∙11H2O composition was characterized by the X-ray diffraction.
期刊介绍:
The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling.
Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry.
Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.