First insights into the satellitomes and new evidence for the absence of canonical insect telomere in the Neuroptera order.

IF 2.3 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Genome Pub Date : 2025-05-30 DOI:10.1139/gen-2025-0018
Diogo C Cabral-de-Mello, Ana Elisa Gasparotto, José M Rico-Porras, Ana Beatriz S M Ferretti, Pablo Mora-Ruiz, Rhavenna Thais Alves-Gomes, Vitória Lourejan, Elton L Scudeler, Pedro Lorite, Vanessa B Bardella
{"title":"First insights into the satellitomes and new evidence for the absence of canonical insect telomere in the Neuroptera order.","authors":"Diogo C Cabral-de-Mello, Ana Elisa Gasparotto, José M Rico-Porras, Ana Beatriz S M Ferretti, Pablo Mora-Ruiz, Rhavenna Thais Alves-Gomes, Vitória Lourejan, Elton L Scudeler, Pedro Lorite, Vanessa B Bardella","doi":"10.1139/gen-2025-0018","DOIUrl":null,"url":null,"abstract":"<p><p>Repetitive DNA is a major component of eukaryotic genomes, playing structural and evolutionary roles. However, in Neuroptera, its characterization remains unexplored. To address this, we analyzed the satellitomes of two Chrysopini (Chrysopidae) species using cytogenomic tools, also investigating telomeric and ribosomal DNA (rDNA). The canonical insect telomeric motif was absent, and rDNA clusters showed variation compared to other neuropterans, despite karyotype stasis (2n = 12, XY). Satellite DNA (satDNA) abundance varied between Ceraeochrysa cincta and Chrysopa pallens, representing a minor fraction of their repetitive DNA content. Notably, no satDNA sequences were shared between species, suggesting a rapid turnover. Exceptionally, the second most abundant satDNA in each species showed low sequence similarity and a putative common origin. A relationship between satDNAs and transposable elements (TEs) was also observed. Chromosome mapping revealed that abundant satDNAs accumulated in euchromatin, providing insights into their genomic distribution. These findings enhance our understanding of satDNA organization in Neuroptera, offering a foundation for future genome assembly efforts and evolutionary studies in these insects.</p>","PeriodicalId":12809,"journal":{"name":"Genome","volume":" ","pages":""},"PeriodicalIF":2.3000,"publicationDate":"2025-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genome","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1139/gen-2025-0018","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Repetitive DNA is a major component of eukaryotic genomes, playing structural and evolutionary roles. However, in Neuroptera, its characterization remains unexplored. To address this, we analyzed the satellitomes of two Chrysopini (Chrysopidae) species using cytogenomic tools, also investigating telomeric and ribosomal DNA (rDNA). The canonical insect telomeric motif was absent, and rDNA clusters showed variation compared to other neuropterans, despite karyotype stasis (2n = 12, XY). Satellite DNA (satDNA) abundance varied between Ceraeochrysa cincta and Chrysopa pallens, representing a minor fraction of their repetitive DNA content. Notably, no satDNA sequences were shared between species, suggesting a rapid turnover. Exceptionally, the second most abundant satDNA in each species showed low sequence similarity and a putative common origin. A relationship between satDNAs and transposable elements (TEs) was also observed. Chromosome mapping revealed that abundant satDNAs accumulated in euchromatin, providing insights into their genomic distribution. These findings enhance our understanding of satDNA organization in Neuroptera, offering a foundation for future genome assembly efforts and evolutionary studies in these insects.

首次深入了解卫星组和神经翅目昆虫端粒缺失的新证据。
重复DNA是真核生物基因组的主要组成部分,在结构和进化方面发挥着重要作用。然而,在神经翅目中,其特征仍然未被探索。为了解决这个问题,我们使用细胞基因组工具分析了两种金蝶(金蝶科)物种的卫星组,并研究了端粒和核糖体DNA (rDNA)。典型的昆虫端粒基序缺失,尽管核型停滞(2n = 12, XY),但rDNA簇与其他神经翼目动物相比存在差异。卫星DNA (satDNA)丰度在中国绿蝶和淡斑蝶之间存在差异,只占其重复DNA含量的一小部分。值得注意的是,物种之间没有共享的satDNA序列,这表明了快速的更替。特别的是,每个物种中第二丰富的satDNA显示出较低的序列相似性和假定的共同起源。satdna和转座因子(te)之间的关系也被观察到。染色体定位揭示了大量的satdna在常染色质中积累,提供了对其基因组分布的见解。这些发现增强了我们对神经翅目动物satDNA组织的认识,为今后神经翅目昆虫基因组组装和进化研究奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Genome
Genome 生物-生物工程与应用微生物
CiteScore
5.30
自引率
3.20%
发文量
42
审稿时长
6-12 weeks
期刊介绍: Genome is a monthly journal, established in 1959, that publishes original research articles, reviews, mini-reviews, current opinions, and commentaries. Areas of interest include general genetics and genomics, cytogenetics, molecular and evolutionary genetics, developmental genetics, population genetics, phylogenomics, molecular identification, as well as emerging areas such as ecological, comparative, and functional genomics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信