Geometrical and electronic structures, stability, and aromaticity of copper-doped boron clusters BnCu0/- (n = 1-13).

IF 2.5 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Nguyen Huu Tho, Ngo Huyen Tran, Pham Hong Cam, Nguyen Minh Tam
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引用次数: 0

Abstract

Context: Besides small pure boron clusters which have been well studied, doped boron clusters, in particular with transition metal dopants, are also increasingly investigated due to their unique geometrical structures accompanied by novel physical and chemical properties. However, studies on copper-doped boron clusters are still scarce despite copper being a transition metal with important properties. In this context, the geometry, stability, and electronic properties of copper-doped boron clusters BnCu0/- (n = 1-13) were systematically studied. The obtained results show that the geometries of neutral and anionic clusters are very similar only at sizes n = 2, 5, 6, 8, and 10. In the ground state, both neutral and anionic clusters tend to be in the low-spin state, except for B2Cu- and B6Cu-. The relative stability of these structures was evaluated using various energetic parameters. Moreover, the aromaticity of the B8Cu- anion along with its enhanced stability are also discussed and rationalized in detail.

Method: In this work, the geometry optimization and the following molecular orbital analyses of BnCu0/- (n = 1-13) structures are performed using density functional theory (DFT), specifically the hybrid functional TPSSh combined with the 6-311+ G(d) basis set for boron atoms and the aug-cc-pVTZ-PP basis set for a copper atom. To obtain more reliable results, the single point energies of some lowest lying isomers whose relative energy values are close corresponding to geometries optimized at the TPSSh/6-311+ G(d) (B) / aug-cc-pVTZ-PP (Cu) level were determined with higher precision at the CCSD(T) level with the same basis sets. Based on the obtained results at the DFT level, the energetic parameters are determined to elucidate thermodynamic stability of BnCu clusters. NICS and ELF indices, the density of states, and AdNDP bond analysis are then examined to rationalize the aromaticity of the anion B8Cu-. All calculations were performed using the Gaussian 09 and Multiwfn programs.

铜掺杂硼簇BnCu0/- (n = 1-13)的几何和电子结构、稳定性和芳香性。
背景:除了小的纯硼团簇已经得到了很好的研究外,掺杂硼团簇,特别是过渡金属掺杂的硼团簇,由于其独特的几何结构以及新的物理和化学性质,也越来越多地被研究。然而,尽管铜是一种具有重要性质的过渡金属,但对铜掺杂硼团簇的研究仍然很少。在此背景下,系统地研究了铜掺杂硼团簇BnCu0/- (n = 1-13)的几何形状、稳定性和电子性质。得到的结果表明,中性和阴离子簇的几何形状非常相似,只有在尺寸n = 2、5、6、8和10时。在基态下,除了B2Cu-和B6Cu-外,中性和阴离子簇都倾向于低自旋态。用各种能量参数评价了这些结构的相对稳定性。此外,还对B8Cu-阴离子的芳构性及其稳定性的增强进行了详细的讨论和论证。方法:利用密度泛函理论(DFT)对BnCu0/- (n = 1-13)结构进行几何优化和分子轨道分析,特别是结合硼原子的6-311+ G(d)基集和铜原子的8 -cc- pvtz - pp基集的杂化泛函TPSSh。为了获得更可靠的结果,在相同基集的CCSD(T)水平上,对相对能量值接近于TPSSh/6-311+ G(d) (B) / augg -cc- pvtz - pp (Cu)优化几何结构的最低层异构体的单点能进行了更高精度的测定。根据在DFT水平上得到的结果,确定了BnCu团簇热力学稳定性的能量参数。然后通过NICS和ELF指数、态密度和AdNDP键分析来合理化阴离子B8Cu-的芳构性。所有计算均使用Gaussian 09和Multiwfn程序进行。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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