A Journey With THeSeuSS: Automated Python Tool for Modeling IR and Raman Vibrational Spectra of Molecules and Solids

IF 16.8 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Ariadni Boziki, Frédéric Ngono Mebenga, Philippe Fernandes, Alexandre Tkatchenko
{"title":"A Journey With THeSeuSS: Automated Python Tool for Modeling IR and Raman Vibrational Spectra of Molecules and Solids","authors":"Ariadni Boziki,&nbsp;Frédéric Ngono Mebenga,&nbsp;Philippe Fernandes,&nbsp;Alexandre Tkatchenko","doi":"10.1002/wcms.70033","DOIUrl":null,"url":null,"abstract":"<p>Vibrational spectroscopy is an indispensable analytical tool that provides structural fingerprints for molecules, solids, and interfaces thereof. This study introduces THeSeuSS (THz Spectra Simulations Software)—an automated computational platform that efficiently simulates IR and Raman spectra for both periodic and non-periodic systems. Using DFT, DFTB and machine-learning force field, THeSeuSS offers robust capabilities for detailed vibrational spectra simulations. Our extensive evaluations and benchmarks demonstrate that THeSeuSS accurately reproduces both previously calculated and experimental spectra, enabling precise comparisons and interpretations of vibrational characteristics in various test cases, including H<sub>2</sub>O and glycine molecules in the gas phase, as well as solid ammonia and solid ibuprofen. Designed with a user-friendly interface and seamless integration with existing computational chemistry tools, THeSeuSS enhances the accessibility and applicability of advanced spectroscopic simulations, supporting research and development in chemical, pharmaceutical, and material sciences.</p>","PeriodicalId":236,"journal":{"name":"Wiley Interdisciplinary Reviews: Computational Molecular Science","volume":"15 3","pages":""},"PeriodicalIF":16.8000,"publicationDate":"2025-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/wcms.70033","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Wiley Interdisciplinary Reviews: Computational Molecular Science","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/wcms.70033","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

Vibrational spectroscopy is an indispensable analytical tool that provides structural fingerprints for molecules, solids, and interfaces thereof. This study introduces THeSeuSS (THz Spectra Simulations Software)—an automated computational platform that efficiently simulates IR and Raman spectra for both periodic and non-periodic systems. Using DFT, DFTB and machine-learning force field, THeSeuSS offers robust capabilities for detailed vibrational spectra simulations. Our extensive evaluations and benchmarks demonstrate that THeSeuSS accurately reproduces both previously calculated and experimental spectra, enabling precise comparisons and interpretations of vibrational characteristics in various test cases, including H2O and glycine molecules in the gas phase, as well as solid ammonia and solid ibuprofen. Designed with a user-friendly interface and seamless integration with existing computational chemistry tools, THeSeuSS enhances the accessibility and applicability of advanced spectroscopic simulations, supporting research and development in chemical, pharmaceutical, and material sciences.

与theseus的旅程:自动Python工具建模分子和固体的红外和拉曼振动光谱
振动光谱学是一种不可缺少的分析工具,可以为分子、固体及其界面提供结构指纹。本研究介绍了THeSeuSS(太赫兹光谱模拟软件),这是一个自动化的计算平台,可以有效地模拟周期和非周期系统的红外和拉曼光谱。使用DFT, DFTB和机器学习力场,THeSeuSS提供了详细的振动谱模拟的强大功能。我们广泛的评估和基准测试表明,theseus准确地再现了先前计算和实验光谱,能够精确地比较和解释各种测试用例中的振动特性,包括气相中的H2O和甘氨酸分子,以及固体氨和固体布洛芬。设计了一个用户友好的界面,并与现有的计算化学工具无缝集成,THeSeuSS增强了先进光谱模拟的可访问性和适用性,支持化学,制药和材料科学的研究和开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Wiley Interdisciplinary Reviews: Computational Molecular Science
Wiley Interdisciplinary Reviews: Computational Molecular Science CHEMISTRY, MULTIDISCIPLINARY-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
28.90
自引率
1.80%
发文量
52
审稿时长
6-12 weeks
期刊介绍: Computational molecular sciences harness the power of rigorous chemical and physical theories, employing computer-based modeling, specialized hardware, software development, algorithm design, and database management to explore and illuminate every facet of molecular sciences. These interdisciplinary approaches form a bridge between chemistry, biology, and materials sciences, establishing connections with adjacent application-driven fields in both chemistry and biology. WIREs Computational Molecular Science stands as a platform to comprehensively review and spotlight research from these dynamic and interconnected fields.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信