Taylor D Coston, Lu Xia, Shelton W Wright, Viriya Hantrakun, Parinya Chamnan, Gumphol Wongsuvan, Rungnapa Phunpang, Adul Dulsuk, Ekkachai Thiansukhon, Ali Shojaie, Narisara Chantratita, Direk Limmathurotsakul, Sina A Gharib, T Eoin West
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引用次数: 0
Abstract
Background: Community-acquired pneumonia (CAP) is a major public health threat globally but is understudied in regions with the highest burden. The host immune response during infection may differ based on the site of infection. We hypothesised that analysis of the plasma metabolome in patients hospitalised with suspected infection could identify host response pathways specific to CAP.
Methods: We analysed the plasma metabolomes of adults admitted to a tertiary care hospital in northeastern Thailand with suspected community-acquired infection. Multivariable linear regression was performed for differential metabolite analyses and the global test was used for pathway analysis comparing patients with CAP versus non-CAP infections and uninfected controls. The least absolute shrinkage and selection operator (LASSO) was used to identify a parsimonious metabolite prognostic signature that was tested on an internal validation set to predict mortality.
Results: 841 metabolites from 107 CAP patients and 152 non-CAP infected patients were analysed. 52 metabolites were differentially abundant between the CAP and non-CAP groups. CAP was characterised by increased metabolites involved in polyamine metabolism and decreased metabolites involved in lipid pathways. 13 pathways were differentially enriched between the CAP and non-CAP groups, consistent with individual metabolite analyses. 40 metabolites and four pathways were associated with CAP-specific mortality. A four-metabolite signature predicted 28-day mortality in CAP (area under the curve 0.79, 95% CI 0.62-0.97).
Conclusion: In a rural tropical setting, CAP induced a distinct metabolomic state compared to non-CAP presentations of infection that may reflect the activation of select host immune responses.
背景:社区获得性肺炎(CAP)是全球主要的公共卫生威胁,但在负担最重的地区尚未得到充分研究。感染时宿主的免疫反应可能因感染部位的不同而不同。我们假设,对疑似感染住院患者的血浆代谢组进行分析,可以确定cap特异性的宿主反应途径。方法:我们分析了泰国东北部一家三级医院收治的疑似社区获得性感染的成人血浆代谢组。对差异代谢物进行多变量线性回归分析,并使用全局测试进行途径分析,比较CAP感染患者与非CAP感染患者和未感染对照。最小绝对收缩和选择算子(LASSO)用于识别简约代谢物预后特征,该特征在内部验证集上进行测试,以预测死亡率。结果:分析了107例CAP患者和152例非CAP感染患者的841种代谢物。52种代谢物在CAP组和非CAP组之间差异丰富。CAP的特征是参与多胺代谢的代谢物增加,参与脂质途径的代谢物减少。13条通路在CAP组和非CAP组之间存在差异富集,与个体代谢物分析一致。40种代谢物和4种途径与cap特异性死亡率相关。四种代谢物特征预测CAP患者28天死亡率(曲线下面积0.79,95% CI 0.62-0.97)。结论:在热带农村环境中,与非CAP感染相比,CAP诱导了不同的代谢组学状态,这可能反映了选择性宿主免疫反应的激活。
期刊介绍:
ERJ Open Research is a fully open access original research journal, published online by the European Respiratory Society. The journal aims to publish high-quality work in all fields of respiratory science and medicine, covering basic science, clinical translational science and clinical medicine. The journal was created to help fulfil the ERS objective to disseminate scientific and educational material to its members and to the medical community, but also to provide researchers with an affordable open access specialty journal in which to publish their work.