Structural insights into substrate recognition of tri-modular xyloglucanase from Aspergillus oryzae

IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yusuke Nakamichi , Naoki Shimada , Masahiro Watanabe , Tatsuya Fujii , Katsuro Yaoi , Tomohiko Matsuzawa
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引用次数: 0

Abstract

Xeg5A from Aspergillus oryzae belongs to glycoside hydrolase family 5 subfamily 4. This enzyme has been characterized as a xyloglucan-specific endo-β-1,4-glucanase (xyloglucanase) that cleaves the main chain of xyloglucan at both unbranched and xylosylated glucosyl residues in an endo-processive mode of action. X-ray crystallography revealed that Xeg5A is a tri-modular enzyme composed of a catalytic, an Ig-like, and a C-terminal CBM46-like domains. Xeg5A structures complexed with branched xyloglucan oligosaccharides at subsites –4 to +4 showed that the recognition of xyloglucan side-chain moieties is important for Xeg5A activity. The crystal structure also provided structural insights into the role of the CBM46-like domain in contributing to regiospecificity and, possibly, processivity.
米曲霉三模木糖葡聚糖酶底物识别的结构研究。
来自米曲霉的Xeg5A属于糖苷水解酶家族5亚家族4。该酶被认为是一种木葡聚糖特异性内切-β-1,4-葡聚糖酶(木葡聚糖酶),它以内切的方式在未支链和木基化的葡萄糖基残基上切割木葡聚糖的主链。x射线晶体学表明,Xeg5A是由催化结构域、类ig结构域和c端类cbm46结构域组成的三模块酶。Xeg5A结构在-4至+4亚位与支链木葡聚糖低聚糖络合,表明木葡聚糖侧链部分的识别对Xeg5A活性很重要。晶体结构还提供了对cbm46样结构域在促进区域特异性和可能的加工性方面的作用的结构见解。
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来源期刊
Journal of structural biology
Journal of structural biology 生物-生化与分子生物学
CiteScore
6.30
自引率
3.30%
发文量
88
审稿时长
65 days
期刊介绍: Journal of Structural Biology (JSB) has an open access mirror journal, the Journal of Structural Biology: X (JSBX), sharing the same aims and scope, editorial team, submission system and rigorous peer review. Since both journals share the same editorial system, you may submit your manuscript via either journal homepage. You will be prompted during submission (and revision) to choose in which to publish your article. The editors and reviewers are not aware of the choice you made until the article has been published online. JSB and JSBX publish papers dealing with the structural analysis of living material at every level of organization by all methods that lead to an understanding of biological function in terms of molecular and supermolecular structure. Techniques covered include: • Light microscopy including confocal microscopy • All types of electron microscopy • X-ray diffraction • Nuclear magnetic resonance • Scanning force microscopy, scanning probe microscopy, and tunneling microscopy • Digital image processing • Computational insights into structure
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