Self-Supervised Feature Learning for Cardiac Cine MR Image Reconstruction

Siying Xu;Marcel Früh;Kerstin Hammernik;Andreas Lingg;Jens Kübler;Patrick Krumm;Daniel Rueckert;Sergios Gatidis;Thomas Küstner
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Abstract

We propose a self-supervised feature learning assisted reconstruction (SSFL-Recon) framework for MRI reconstruction to address the limitation of existing supervised learning methods. Although recent deep learning-based methods have shown promising performance in MRI reconstruction, most require fully-sampled images for supervised learning, which is challenging in practice considering long acquisition times under respiratory or organ motion. Moreover, nearly all fully-sampled datasets are obtained from conventional reconstruction of mildly accelerated datasets, thus potentially biasing the achievable performance. The numerous undersampled datasets with different accelerations in clinical practice, hence, remain underutilized. To address these issues, we first train a self-supervised feature extractor on undersampled images to learn sampling-insensitive features. The pre-learned features are subsequently embedded in the self-supervised reconstruction network to assist in removing artifacts. Experiments were conducted retrospectively on an in-house 2D cardiac Cine dataset, including 91 cardiovascular patients and 38 healthy subjects. The results demonstrate that the proposed SSFL-Recon framework outperforms existing self-supervised MRI reconstruction methods and even exhibits comparable or better performance to supervised learning up to ${16}\times $ retrospective undersampling. The feature learning strategy can effectively extract global representations, which have proven beneficial in removing artifacts and increasing generalization ability during reconstruction.
心脏电影MR图像重建的自监督特征学习
我们提出了一种自监督特征学习辅助重建(SSFL-Recon)框架用于MRI重建,以解决现有监督学习方法的局限性。尽管最近基于深度学习的方法在MRI重建中表现出了良好的性能,但大多数方法都需要全采样图像进行监督学习,这在实践中具有挑战性,因为在呼吸或器官运动下需要长时间的获取时间。此外,几乎所有的全采样数据集都是从温和加速数据集的传统重建中获得的,因此可能会影响可实现的性能。因此,临床实践中具有不同加速的大量未充分采样数据集仍未得到充分利用。为了解决这些问题,我们首先在欠采样图像上训练一个自监督特征提取器来学习采样不敏感特征。预先学习的特征随后被嵌入到自监督重建网络中,以帮助去除伪影。实验回顾性地在内部二维心脏电影数据集上进行,包括91名心血管患者和38名健康受试者。结果表明,所提出的SSFL-Recon框架优于现有的自监督MRI重建方法,甚至表现出与监督学习相当或更好的性能,最高可达100亿次回顾性欠采样。特征学习策略可以有效地提取全局表示,在重建过程中有利于去除伪影,提高泛化能力。
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