Genetic analyses of Myc and hypusine circuits in tumorigenesis.

4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology
Methods in enzymology Pub Date : 2025-01-01 Epub Date: 2025-03-21 DOI:10.1016/bs.mie.2025.02.005
Shima Nakanishi, John L Cleveland
{"title":"Genetic analyses of Myc and hypusine circuits in tumorigenesis.","authors":"Shima Nakanishi, John L Cleveland","doi":"10.1016/bs.mie.2025.02.005","DOIUrl":null,"url":null,"abstract":"<p><p>A prominent metabolic pathway induced by MYC family oncoproteins in cancer is the polyamine-hypusine circuit, which post-translationally modifies a specific lysine residue of eukaryotic translation initiation factor 5 A (eIF5A) with a unique amino acid coined hypusine [N<sup>ε</sup>-(4-amino-2-hydroxybutyl)lysine]. This modification occurs in a two-step process, whereby the aminobutyl group of the polyamine spermidine is covalently linked to lysine-50 of eIF5A via deoxyhypusine synthase (DHPS) to form the intermediate deoxyhypusinated eIF5A, which is subsequently hydoxylated by deoxyhypusine hydroxylase (DOHH) to form the fully mature eIF5A<sup>Hyp</sup>. As a result, eIF5A<sup>Hyp</sup> is elevated in MYC-driven cancers. Recently it has become evident that eIF5A<sup>Hyp</sup> (i) plays key roles in the development, progression and maintenance of tumors; and (ii) eIF5A<sup>Hyp</sup> functions are often tissue/cell context-specific. Thus, it is important to mechanistically assess how eIF5A<sup>Hyp</sup> affects normal cells and tumorigenesis using suitable in vivo and ex vivo models. In this chapter, we describe the methods used in our laboratory to assess the effects of MYC-polyamine-hypusine axis on the development and maintenance of MYC-driven B-cell lymphoma. The goals of this chapter are twofold. First, we discuss genetic and cell biological approaches that can be applied to assess roles of eIF5A<sup>Hyp</sup> on lymphoma and normal B cell development. Second, we discuss methods that can be used to assess the roles of eIF5A<sup>Hyp</sup> on the growth and maintenance of lymphoma. Collectively, these approaches provide a template that can be applied to evaluate roles of any putative regulator of the development and/or maintenance of lymphoma.</p>","PeriodicalId":18662,"journal":{"name":"Methods in enzymology","volume":"715 ","pages":"1-17"},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Methods in enzymology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/bs.mie.2025.02.005","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/21 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

Abstract

A prominent metabolic pathway induced by MYC family oncoproteins in cancer is the polyamine-hypusine circuit, which post-translationally modifies a specific lysine residue of eukaryotic translation initiation factor 5 A (eIF5A) with a unique amino acid coined hypusine [Nε-(4-amino-2-hydroxybutyl)lysine]. This modification occurs in a two-step process, whereby the aminobutyl group of the polyamine spermidine is covalently linked to lysine-50 of eIF5A via deoxyhypusine synthase (DHPS) to form the intermediate deoxyhypusinated eIF5A, which is subsequently hydoxylated by deoxyhypusine hydroxylase (DOHH) to form the fully mature eIF5AHyp. As a result, eIF5AHyp is elevated in MYC-driven cancers. Recently it has become evident that eIF5AHyp (i) plays key roles in the development, progression and maintenance of tumors; and (ii) eIF5AHyp functions are often tissue/cell context-specific. Thus, it is important to mechanistically assess how eIF5AHyp affects normal cells and tumorigenesis using suitable in vivo and ex vivo models. In this chapter, we describe the methods used in our laboratory to assess the effects of MYC-polyamine-hypusine axis on the development and maintenance of MYC-driven B-cell lymphoma. The goals of this chapter are twofold. First, we discuss genetic and cell biological approaches that can be applied to assess roles of eIF5AHyp on lymphoma and normal B cell development. Second, we discuss methods that can be used to assess the roles of eIF5AHyp on the growth and maintenance of lymphoma. Collectively, these approaches provide a template that can be applied to evaluate roles of any putative regulator of the development and/or maintenance of lymphoma.

肿瘤发生中Myc和hypusine回路的遗传分析。
MYC家族癌蛋白在癌症中诱导的一个重要代谢途径是多胺-hypusine回路,它在翻译后用一种独特的氨基酸hypusine修饰真核翻译起始因子5a (eIF5A)的特定赖氨酸残基[Nε-(4-氨基-2-羟基丁基)赖氨酸]。这种修饰发生在两步过程中,即多胺亚精胺的氨基丁基通过脱氧hypusine synthase (DHPS)与eIF5A的赖氨酸-50共价连接,形成中间脱氧hypusine eIF5A,随后被脱氧hypusine羟化酶(DOHH)羟化,形成完全成熟的eIF5AHyp。因此,eIF5AHyp在myc驱动的癌症中升高。最近发现eIF5AHyp (i)在肿瘤的发生、进展和维持中起着关键作用;(ii) eIF5AHyp功能通常是组织/细胞特异性的。因此,利用合适的体内和离体模型,从机制上评估eIF5AHyp如何影响正常细胞和肿瘤发生是很重要的。在本章中,我们描述了在我们的实验室中用于评估myc -多胺-hypusine轴对myc驱动的b细胞淋巴瘤的发展和维持的影响的方法。本章的目标有两个。首先,我们讨论了可用于评估eIF5AHyp在淋巴瘤和正常B细胞发育中的作用的遗传和细胞生物学方法。其次,我们讨论了可用于评估eIF5AHyp在淋巴瘤生长和维持中的作用的方法。总的来说,这些方法提供了一个模板,可用于评估任何假定的淋巴瘤发展和/或维持的调节因子的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Methods in enzymology
Methods in enzymology 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
308
审稿时长
3-6 weeks
期刊介绍: The critically acclaimed laboratory standard for almost 50 years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Each volume is eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 500 volumes the series contains much material still relevant today and is truly an essential publication for researchers in all fields of life sciences, including microbiology, biochemistry, cancer research and genetics-just to name a few. Five of the 2013 Nobel Laureates have edited or contributed to volumes of MIE.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信