OMOP-on-FHIR: Integrating the Clinical Data Through FHIR Bundle to OMOP CDM.

Prabath Jayathissa, Lukas Rohatsch, Stefan Sauermann, Rada Hussein
{"title":"OMOP-on-FHIR: Integrating the Clinical Data Through FHIR Bundle to OMOP CDM.","authors":"Prabath Jayathissa, Lukas Rohatsch, Stefan Sauermann, Rada Hussein","doi":"10.3233/SHTI250432","DOIUrl":null,"url":null,"abstract":"<p><p>The harmonization of the OMOP Common Data Model (CDM) with HL7 FHIR aims to enhance interoperability in clinical research by harmonizing diverse healthcare datasets. This process, referred to as OMOP-on-FHIR, leverages FHIR Bundles for real-time clinical data exchange and transforms these resources into OMOP CDM format using an ETL process. The ETL pipeline, facilitated by tools like XSLT, enables the extraction, transformation, and loading of data while maintaining semantic consistency. By bridging these two standards, OMOP-on-FHIR promotes the seamless exchange of data across clinical systems and research-oriented databases, supporting global health studies, advanced analytics, and personalized medicine. This methodology advances cross-border research by providing a standardized approach to data management and analysis, thereby improving healthcare outcomes.</p>","PeriodicalId":94357,"journal":{"name":"Studies in health technology and informatics","volume":"327 ","pages":"667-671"},"PeriodicalIF":0.0000,"publicationDate":"2025-05-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Studies in health technology and informatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3233/SHTI250432","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

The harmonization of the OMOP Common Data Model (CDM) with HL7 FHIR aims to enhance interoperability in clinical research by harmonizing diverse healthcare datasets. This process, referred to as OMOP-on-FHIR, leverages FHIR Bundles for real-time clinical data exchange and transforms these resources into OMOP CDM format using an ETL process. The ETL pipeline, facilitated by tools like XSLT, enables the extraction, transformation, and loading of data while maintaining semantic consistency. By bridging these two standards, OMOP-on-FHIR promotes the seamless exchange of data across clinical systems and research-oriented databases, supporting global health studies, advanced analytics, and personalized medicine. This methodology advances cross-border research by providing a standardized approach to data management and analysis, thereby improving healthcare outcomes.

OMOP-on-FHIR:通过FHIR Bundle整合临床数据到OMOP CDM。
OMOP公共数据模型(CDM)与HL7 FHIR的协调旨在通过协调不同的医疗保健数据集来增强临床研究中的互操作性。这个过程被称为OMOP-on-FHIR,利用FHIR bundle进行实时临床数据交换,并使用ETL过程将这些资源转换为OMOP CDM格式。在XSLT等工具的推动下,ETL管道支持数据的提取、转换和加载,同时保持语义一致性。通过连接这两个标准,OMOP-on-FHIR促进了临床系统和研究型数据库之间数据的无缝交换,支持全球健康研究、高级分析和个性化医疗。该方法通过提供数据管理和分析的标准化方法来推进跨境研究,从而改善医疗保健结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信