{"title":"Endo-1,4-β-D-xylanase Assay Using Azo-Xylan and Variants Thereof.","authors":"Luca Bombardi, Annalaura Coltro, Salvatore Fusco","doi":"10.21769/BioProtoc.5283","DOIUrl":null,"url":null,"abstract":"<p><p>Xylan is the main component of hemicellulose and consists of a complex heteropolysaccharide with a heterogeneous structure. This framework, in addition to the crystalline structure of cellulosic fibers and the rigidity of lignin, makes lignocellulosic biomass (LCB) highly recalcitrant to degradation. Xylanases are glycoside hydrolases that cleave the β-1,4-glycoside linkages in the xylan backbone and have attracted increasing attention due to their potential uses in various industrial sectors such as pulp and paper, baking, pharmaceuticals, and lignocellulosic biorefining. For decades, the measurement of xylanase activity was based on reducing sugar quantification methods like DNS or Nelson/Somogyi assays, with numerous limitations in terms of specificity and interference from other enzymatic activities. A better alternative is the colorimetric Azo-Xylan assay, which specifically measures the endo-1,4-β-D-xylanase activity. In this study, the Azo-Xylan protocol was adapted from the company Megazyme to determine the enzymatic activity of thermostable xylanases produced by microbial consortia (i.e., microbiomes), aiming to determine biochemical features such as temperature and pH optima, thermostability, and shelf life. This modified approach offers a rapid, cost-effective, and highly specific method for the determination of xylanase activity in complex mixtures, helping the development of a xylanase-based method for the hydrolysis of hard-degrading substrates in bio-based industries. Key features • Direct enzyme assay for qualitative xylanase activity detection or quantitative measurement with a calibration curve. • Specific for determination of endo-1,4-β-D-xylanase activity, allowing to overcome interferences by enzymes with other activities.</p>","PeriodicalId":93907,"journal":{"name":"Bio-protocol","volume":"15 8","pages":"e5283"},"PeriodicalIF":1.0000,"publicationDate":"2025-04-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12021678/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bio-protocol","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.21769/BioProtoc.5283","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Xylan is the main component of hemicellulose and consists of a complex heteropolysaccharide with a heterogeneous structure. This framework, in addition to the crystalline structure of cellulosic fibers and the rigidity of lignin, makes lignocellulosic biomass (LCB) highly recalcitrant to degradation. Xylanases are glycoside hydrolases that cleave the β-1,4-glycoside linkages in the xylan backbone and have attracted increasing attention due to their potential uses in various industrial sectors such as pulp and paper, baking, pharmaceuticals, and lignocellulosic biorefining. For decades, the measurement of xylanase activity was based on reducing sugar quantification methods like DNS or Nelson/Somogyi assays, with numerous limitations in terms of specificity and interference from other enzymatic activities. A better alternative is the colorimetric Azo-Xylan assay, which specifically measures the endo-1,4-β-D-xylanase activity. In this study, the Azo-Xylan protocol was adapted from the company Megazyme to determine the enzymatic activity of thermostable xylanases produced by microbial consortia (i.e., microbiomes), aiming to determine biochemical features such as temperature and pH optima, thermostability, and shelf life. This modified approach offers a rapid, cost-effective, and highly specific method for the determination of xylanase activity in complex mixtures, helping the development of a xylanase-based method for the hydrolysis of hard-degrading substrates in bio-based industries. Key features • Direct enzyme assay for qualitative xylanase activity detection or quantitative measurement with a calibration curve. • Specific for determination of endo-1,4-β-D-xylanase activity, allowing to overcome interferences by enzymes with other activities.
木聚糖是半纤维素的主要成分,是一种具有异质结构的复杂杂多糖。这种框架,加上纤维素纤维的结晶结构和木质素的刚性,使得木质纤维素生物质(LCB)高度难以降解。木聚糖酶是一种糖苷水解酶,它可以切割木聚糖主链上的β-1,4-糖苷键,由于其在制浆造纸、烘焙、制药和木质纤维素生物精制等各个工业领域的潜在用途,越来越受到人们的关注。几十年来,木聚糖酶活性的测定是基于还原糖定量方法,如DNS或Nelson/Somogyi测定法,在特异性和其他酶活性的干扰方面存在许多局限性。一种更好的选择是比色法偶氮木聚糖测定,它专门测量内切-1,4-β- d -木聚糖酶的活性。在本研究中,偶氮木聚糖方案采用Megazyme公司的方法来测定微生物群落(即微生物组)产生的耐热木聚糖酶的酶活性,旨在确定生物化学特征,如温度和pH最优、热稳定性和保质期。这种改进的方法为测定复杂混合物中的木聚糖酶活性提供了一种快速、经济、高度特异性的方法,有助于开发一种基于木聚糖酶的方法,用于生物基工业中硬降解底物的水解。直接酶测定定性木聚糖酶活性检测或定量测量与校准曲线。•特异性测定内切-1,4-β- d -木聚糖酶活性,允许克服其他活性酶的干扰。