Super-Field MRI Synthesis for Infant Brains Enhanced by Dual Channel Latent Diffusion.

Austin Tapp, Can Zhao, Holger R Roth, Jeffrey Tanedo, Syed Muhammad Anwar, Niall J Bourke, Joseph Hajnal, Victoria Nankabirwa, Sean Deoni, Natasha Lepore, Marius George Linguraru
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Abstract

In resource-limited settings, portable ultra-low-field (uLF, i.e., 0.064T) magnetic resonance imaging (MRI) systems expand accessibility of radiological scanning, particularly for low-income areas as well as underserved populations like neonates and infants. However, compared to high-field (HF, e.g., ≥ 1.5T) systems, inferior image quality in uLF scanning poses challenges for research and clinical use. To address this, we introduce Super-Field Network (SFNet), a custom swinUNETRv2 with generative adversarial network components that uses uLF MRIs to generate super-field (SF) images comparable to HF MRIs. We acquired a cohort of infant data (n=30, aged 0-2 years) with paired uLF-HF MRI data from a resource-limited setting with an underrepresented population in research. To enhance the small dataset, we present a novel use of latent diffusion to create dual-channel (uLF-HF) paired MRIs. We compare SFNet with state-of-the-art synthesis methods by HF-SF image similarity perceptual scores and by automated HF and SF segmentations of white matter (WM), gray matter (GM), and cerebrospinal fluid (CSF). The best performance was achieved by SFNet trained on the latent diffusion enhanced dataset yielding state-of-the-art results in Fréchet inception distance at 9.08 ± 1.21, perceptual similarity at 0.11 ± 0.01, and PSNR at 22.64 ± 1.31. True HF and SF segmentations had a strong overlap with Dice similarity coefficients of 0.71 ± 0.1, 0.79 ± 0.2, and 0.73 ± 0.08 for WM, GM, and CSF, respectively, in the developing infant brain with incomplete myelination, and displayed 166%, 107%, and 106% improvement over respective uLF-based segmentation metrics. SF MRI supports health equity by enhancing the clinical use of uLF imaging systems and improving the diagnostic capabilities of low-cost portable MRI systems in resource-limited settings and for underserved populations. Our code is made openly available at https://github.com/AustinTapp/SFnet.

双通道潜在扩散增强婴儿脑超场MRI合成。
在资源有限的情况下,便携式超低场(uLF,即0.064T)磁共振成像(MRI)系统扩大了放射扫描的可及性,特别是对低收入地区以及新生儿和婴儿等服务不足人群。然而,与高场(HF,例如≥1.5T)系统相比,超低频扫描的图像质量较差,给研究和临床应用带来了挑战。为了解决这个问题,我们引入了超级场网络(SFNet),这是一个自定义的swinUNETRv2,具有生成对抗网络组件,它使用uLF mri生成与HF mri相当的超级场(SF)图像。我们获得了一组婴儿数据(n=30, 0-2岁)和配对的uLF-HF MRI数据,这些数据来自资源有限的环境,研究中代表性不足的人群。为了增强小数据集,我们提出了一种新的使用潜在扩散来创建双通道(uLF-HF)配对mri。我们通过HF-SF图像相似性感知评分和脑白质(WM)、灰质(GM)和脑脊液(CSF)的自动HF和SF分割,将SFNet与最先进的合成方法进行比较。在潜在扩散增强数据集上训练的SFNet获得了最好的性能,获得了最先进的结果,其中fr起始距离为9.08±1.21,感知相似度为0.11±0.01,PSNR为22.64±1.31。在髓鞘发育不完全的婴儿脑中,WM、GM和CSF的真实HF和SF分割与Dice相似系数有很强的重叠,分别为0.71±0.1、0.79±0.2和0.73±0.08,比各自基于ulf的分割指标提高了166%、107%和106%。SF MRI通过加强uLF成像系统的临床使用,提高低成本便携式MRI系统在资源有限的环境和服务不足人群中的诊断能力,支持健康公平。我们的代码可以在https://github.com/AustinTapp/SFnet上公开获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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