Two highly specific growth-coupled biosensor for glycolaldehyde detection across micromolar and millimolar concentrations.

IF 2.6 Q2 BIOCHEMICAL RESEARCH METHODS
Synthetic biology (Oxford, England) Pub Date : 2025-04-04 eCollection Date: 2025-01-01 DOI:10.1093/synbio/ysaf004
Paul A Gómez-Coronado, Armin Kubis, Maria Kowald, Rahma Ute, Charlie Cotton, Steffen N Lindner, Arren Bar-Even, Tobias J Erb
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Abstract

Glycolaldehyde (GA), the smallest sugar, has significant potential as a biomass-derived platform chemical and is a key metabolite in several synthetic pathways for one-carbon metabolism and new-to-nature photorespiration. This study introduces two metabolic schemes for engineering Escherichia coli into GA biosensors. Through creating GA-dependent auxotrophies, we link growth of these strains to GA-dependent biosynthesis of the essential vitamin pyridoxal-5-phosphate, and 2-ketoglutarate, respectively. We characterized and optimized these strains for the quantification of externally added GA from 2 µM to 1.5 mM. We also demonstrate the capability of these strains to detect GA that is produced intracellularly through different metabolic routes and from different substrates such as xylose, ethylene glycol, and glycolate. Our biosensors offer complementary sensitivities and features, opening up different applications in metabolic engineering and synthetic biology, which we demonstrate in a proof-of-principle by providing the first in vivo demonstration of the reduction of glycolate to GA by a new-to-nature route using engineered enzymes.

两个高度特异性的生长耦合生物传感器的乙醇醛检测跨微摩尔和毫摩尔浓度。
乙醇醛(GA)是最小的糖,具有作为生物质衍生平台化学物质的巨大潜力,是单碳代谢和新自然光呼吸的几种合成途径中的关键代谢物。本研究介绍了两种将大肠杆菌转化为GA生物传感器的代谢方案。通过创造依赖ga的营养缺失,我们将这些菌株的生长与必需维生素吡哆醛-5-磷酸和2-酮戊二酸的依赖ga的生物合成联系起来。我们对这些菌株进行了表征和优化,以定量外源添加GA从2µM到1.5 mM。我们还证明了这些菌株能够检测通过不同代谢途径和不同底物(如木糖、乙二醇和乙醇酸)在细胞内产生的GA。我们的生物传感器具有互补的灵敏度和特性,在代谢工程和合成生物学中开辟了不同的应用,我们通过使用工程酶的新途径首次在体内演示将乙醇酸还原为GA,从而进行了原理验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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