A novel transfer learning framework for non-uniform conductivity estimation with limited data in personalized brain stimulation.

IF 3.3 3区 医学 Q2 ENGINEERING, BIOMEDICAL
Yoshiki Kubota, Sachiko Kodera, Akimasa Hirata
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引用次数: 0

Abstract

Objective. Personalized transcranial magnetic stimulation (TMS) requires individualized head models that incorporate non-uniform conductivity to enable target-specific stimulation. Accurately estimating non-uniform conductivity in individualized head models remains a challenge due to the difficulty of obtaining precise ground truth data. To address this issue, we have developed a novel transfer learning-based approach for automatically estimating non-uniform conductivity in a human head model with limited data.Approach. The proposed method complements the limitations of the previous conductivity network (CondNet) and improves the conductivity estimation accuracy. This method generates a segmentation model from T1- and T2-weighted magnetic resonance images, which is then used for conductivity estimation via transfer learning. To enhance the model's representation capability, a Transformer was incorporated into the segmentation model, while the conductivity estimation model was designed using a combination of Attention Gates and Residual Connections, enabling efficient learning even with a small amount of data.Main results. The proposed method was evaluated using 1494 images, demonstrating a 2.4% improvement in segmentation accuracy and a 29.1% increase in conductivity estimation accuracy compared with CondNet. Furthermore, the proposed method achieved superior conductivity estimation accuracy even with only three training cases, outperforming CondNet, which was trained on an adequate number of cases. The conductivity maps generated by the proposed method yielded better results in brain electrical field simulations than CondNet.Significance. These findings demonstrate the high utility of the proposed method in brain electrical field simulations and suggest its potential applicability to other medical image analysis tasks and simulations.

个性化脑刺激中有限数据下非均匀电导率估计的迁移学习框架。
目标。个性化经颅磁刺激(TMS)需要个性化的头部模型,该模型包含非均匀电导率,以实现目标特异性刺激。由于难以获得精确的地面真值数据,因此准确估计个性化头部模型中的非均匀电导率仍然是一个挑战。为了解决这个问题,我们开发了一种基于迁移学习的新方法,用于在有限数据的情况下自动估计人类头部模型中的非均匀电导率。该方法弥补了以往电导率网络(CondNet)的局限性,提高了电导率估计的精度。该方法从T1和t2加权磁共振图像中生成分割模型,然后通过迁移学习用于电导率估计。为了增强模型的表示能力,在分割模型中加入了Transformer,而电导率估计模型则采用了注意门和残余连接的组合设计,即使在少量数据下也能实现高效的学习。主要的结果。使用1494张图像对该方法进行了评估,与CondNet相比,该方法的分割精度提高了2.4%,电导率估计精度提高了29.1%。此外,即使只有三个训练案例,所提出的方法也获得了更高的电导率估计精度,优于CondNet,后者在足够数量的案例上进行了训练。该方法生成的电导率图在脑电场模拟中的效果优于condnet。这些发现证明了该方法在脑电场模拟中的高实用性,并表明其在其他医学图像分析任务和模拟中的潜在适用性。
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来源期刊
Physics in medicine and biology
Physics in medicine and biology 医学-工程:生物医学
CiteScore
6.50
自引率
14.30%
发文量
409
审稿时长
2 months
期刊介绍: The development and application of theoretical, computational and experimental physics to medicine, physiology and biology. Topics covered are: therapy physics (including ionizing and non-ionizing radiation); biomedical imaging (e.g. x-ray, magnetic resonance, ultrasound, optical and nuclear imaging); image-guided interventions; image reconstruction and analysis (including kinetic modelling); artificial intelligence in biomedical physics and analysis; nanoparticles in imaging and therapy; radiobiology; radiation protection and patient dose monitoring; radiation dosimetry
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