Uncommon N-Glycan Structures in Anhydrobiotic Tardigrades.

IF 6.1 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Hirokazu Yagi, Taiki Saito, Shih-Yun Guu, Nao Yamakawa, Shigeru Shimamura, Sachiko Kondo, Maho Yagi-Utsumi, Ken Takai, Jun-Ichi Furukawa, Yann Guerardel, Kay-Hooi Khoo, Kazuharu Arakawa, Koichi Kato
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Abstract

We characterized the N-glycosylation profiles of anhydrobiotic tardigrades, R. varieornatus and H. exemplaris, identifying high-mannose, paucimannose, and complex-type oligosaccharides, while hybrid-type glycans were undetectable. Notably, paucimannose-type oligosaccharides accounted for 39% of the N-glycans in R. varieornatus and 17% in H. exemplaris, with a substantial proportion of them exhibiting fucosylation of the innermost GlcNAc via an α1,6-linkage. This core fucosylation pattern, common to all animals, was observed alongside a distinctive glycosylation signature prominently observed in tardigrades: complex-type glycans lacking galactosylation but containing α1,3-fucosylated GlcNAc at non-reducing termini. This structure was more prevalent in H. exemplaris, with 22 out of 87 identified glycoproteins expressing the Fucα1,3-GlcNAc motif, including eight induced during anhydrobiosis. Key glycoproteins such as Cu/Zn-superoxide dismutase and papilin, implicated in oxidative stress protection and extracellular matrix remodeling, were among those modified. Comparative analyses reveal that non-reducing terminal α1,3-fucosylation in tardigrades is distinct from the mammalian Lewis X antigen and similar structures found in invertebrates, suggesting a unique substrate specificity of fucosyltransferases in these species. Genomic analysis identified homologs of Fut9 and FucTC, indicating potential candidates responsible for this glycosylation pattern. Our findings provide new insights into the molecular mechanisms of glycosylation in tardigrades and its relevance to their extreme stress tolerance.

无水缓步动物中罕见的n -聚糖结构。
我们对无水缓步动物、R. varieornatus和H. exemplaris的n -糖基化谱进行了表征,鉴定出高甘露糖、低甘露糖和复合型低聚糖,而杂交型聚糖未检测到。值得注意的是,低聚氨基糖型寡糖在异花蓟马中占39%,在范例蓟马中占17%,其中很大一部分通过α1,6-连锁将最内层的GlcNAc集中化。这种核心聚焦模式在所有动物中都很常见,与此同时,在缓步动物中也观察到一种独特的糖基化特征:复合物型聚糖缺乏半乳糖基化,但在非还原末端含有α1,3-聚焦的GlcNAc。这种结构在H. exemplaris中更为普遍,鉴定的87个糖蛋白中有22个表达fuc α1,3- glcnac基序,其中8个是在缺氧时诱导的。关键的糖蛋白,如Cu/ zn超氧化物歧化酶和乳头蛋白,涉及氧化应激保护和细胞外基质重塑,在这些修改。对比分析表明,缓步动物的非还原末端α1,3-聚焦化与哺乳动物的Lewis X抗原和无脊椎动物的相似结构不同,表明这些物种的聚焦转移酶具有独特的底物特异性。基因组分析确定了Fut9和FucTC的同源物,表明了这种糖基化模式的潜在候选者。我们的发现为缓步动物糖基化的分子机制及其与极端胁迫耐受性的相关性提供了新的见解。
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来源期刊
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics 生物-生化研究方法
CiteScore
11.50
自引率
4.30%
发文量
131
审稿时长
84 days
期刊介绍: The mission of MCP is to foster the development and applications of proteomics in both basic and translational research. MCP will publish manuscripts that report significant new biological or clinical discoveries underpinned by proteomic observations across all kingdoms of life. Manuscripts must define the biological roles played by the proteins investigated or their mechanisms of action. The journal also emphasizes articles that describe innovative new computational methods and technological advancements that will enable future discoveries. Manuscripts describing such approaches do not have to include a solution to a biological problem, but must demonstrate that the technology works as described, is reproducible and is appropriate to uncover yet unknown protein/proteome function or properties using relevant model systems or publicly available data. Scope: -Fundamental studies in biology, including integrative "omics" studies, that provide mechanistic insights -Novel experimental and computational technologies -Proteogenomic data integration and analysis that enable greater understanding of physiology and disease processes -Pathway and network analyses of signaling that focus on the roles of post-translational modifications -Studies of proteome dynamics and quality controls, and their roles in disease -Studies of evolutionary processes effecting proteome dynamics, quality and regulation -Chemical proteomics, including mechanisms of drug action -Proteomics of the immune system and antigen presentation/recognition -Microbiome proteomics, host-microbe and host-pathogen interactions, and their roles in health and disease -Clinical and translational studies of human diseases -Metabolomics to understand functional connections between genes, proteins and phenotypes
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