Proteomic Analysis and 2-Hydroxyisobutyrylation Profiling in Metabolic Syndrome Induced Restenosis.

IF 6.1 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Xiangyu Liu, Liping Zhou, Wenjing Huang, Yanyan Yang, Yijun Yang, Tianwei Liu, Mingjin Guo, Tao Yu, Yongxin Li
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引用次数: 0

Abstract

Restenosis is the primary complication following stenting for coronary and peripheral arterial disease, posing an ongoing clinical challenge. Metabolic syndrome (MetS), characterized by metabolic disturbances, has been identified as an independent predictor for postoperative restenosis in coronary and carotid arteries, potentially due to endothelial dysfunction and augmented oxidative stress in cells, while its specific regulatory mechanism is still largely unknown. Lysine 2-hydroxyisobutyrylation (Khib), a recently identified posttranslational modification, plays a crucial role in transcriptional regulation and cellular metabolism. However, there is a lack of comprehensive analysis of the proteome and Khib modifications within restenotic vessels in the context of MetS, as well as in the understanding of the associated pathophysiology. In this study, we observed a significant upregulation of Khib in restenotic arteries induced by MetS, confirmed by animal and cellular experiments. Further, using high-throughput liquid chromatography-mass spectrometry, we catalogued 15,558 Khib sites across 2568 proteins, implicating a multitude of biological functions. Analysis revealed 2007 Khib sites on 1002 proteins with considerable differential modifications which are present within the cytoplasm and nucleus. Interestingly, proteins located in the mitochondria, endoplasmic reticulum, and cell membrane also exhibit distinct expression and modification profiles to varying extents that related to vascular smooth muscle contraction, platelet activation, and the PI3K-Akt signaling pathway. Notably, the level of COL1A1 protein detected in the protein-protein interaction pathway network and the level of Khib modification are diametrically opposed, suggesting a significant role in the disease's pathogenesis. This study provides the first comprehensive proteomic and Khib modification overview of MetS-related in-stent restenosis vasculature, offering key insights to inform novel therapeutic approaches for restenosis mitigation.

代谢综合征诱导再狭窄的蛋白质组学分析和2-羟基异丁基化谱。
再狭窄是冠状动脉和外周动脉疾病(PAD)支架植入术后的主要并发症,是一个持续的临床挑战。代谢综合征(MetS)以代谢紊乱为特征,已被确定为冠状动脉和颈动脉术后再狭窄的独立预测因子,可能是由于内皮功能障碍和细胞氧化应激增强,而其具体的调节机制仍在很大程度上未知。赖氨酸2-羟基异丁基化(Lysine 2-hydroxyisobutyrylation, Khib)是最近发现的一种翻译后修饰,在转录调控和细胞代谢中起着至关重要的作用。然而,在MetS的背景下,缺乏对再狭窄血管中蛋白质组和Khib修饰的全面分析,以及对相关病理生理学的理解。在这项研究中,我们观察到由MetS诱导的再狭窄动脉中Khib的显著上调,这一点得到了动物和细胞实验的证实。此外,使用高通量液相色谱-质谱法,我们在2,568个蛋白质中编录了15,558个Khib位点,涉及多种生物功能。分析显示,在细胞质和细胞核内存在的1002种具有相当差异修饰的蛋白质上有2007个Khib位点。有趣的是,线粒体、内质网和细胞膜中的蛋白质也表现出不同程度的表达和修饰谱,这些蛋白与血管平滑肌收缩、血小板活化和PI3K-Akt信号通路有关。值得注意的是,PPI通路网络中检测到的COL1A1蛋白水平与Khib修饰水平截然相反,提示在疾病的发病机制中起重要作用。该研究首次全面概述了与支架内再狭窄相关的血管系统的蛋白质组学和Khib修饰,为缓解再狭窄的新治疗方法提供了关键见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics 生物-生化研究方法
CiteScore
11.50
自引率
4.30%
发文量
131
审稿时长
84 days
期刊介绍: The mission of MCP is to foster the development and applications of proteomics in both basic and translational research. MCP will publish manuscripts that report significant new biological or clinical discoveries underpinned by proteomic observations across all kingdoms of life. Manuscripts must define the biological roles played by the proteins investigated or their mechanisms of action. The journal also emphasizes articles that describe innovative new computational methods and technological advancements that will enable future discoveries. Manuscripts describing such approaches do not have to include a solution to a biological problem, but must demonstrate that the technology works as described, is reproducible and is appropriate to uncover yet unknown protein/proteome function or properties using relevant model systems or publicly available data. Scope: -Fundamental studies in biology, including integrative "omics" studies, that provide mechanistic insights -Novel experimental and computational technologies -Proteogenomic data integration and analysis that enable greater understanding of physiology and disease processes -Pathway and network analyses of signaling that focus on the roles of post-translational modifications -Studies of proteome dynamics and quality controls, and their roles in disease -Studies of evolutionary processes effecting proteome dynamics, quality and regulation -Chemical proteomics, including mechanisms of drug action -Proteomics of the immune system and antigen presentation/recognition -Microbiome proteomics, host-microbe and host-pathogen interactions, and their roles in health and disease -Clinical and translational studies of human diseases -Metabolomics to understand functional connections between genes, proteins and phenotypes
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